Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RP005 | RP006 | gene:17555088 | gene:17555089 | Unknown. | Unknown. | 0.999 |
RP005 | RP561 | gene:17555088 | gene:17555641 | Unknown. | Unknown. | 0.593 |
RP005 | RP680 | gene:17555088 | gene:17555757 | Unknown. | UBIQUINONE/MENAQUINONE BIOSYNTHESIS METHLYTRANSFERASE UBIE (ubiE); Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | 0.560 |
RP005 | RP686 | gene:17555088 | gene:17555763 | Unknown. | 4-HYDROXYBENZOATE OCTAPRENYLTRANSFERASE (ubiA); Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.453 |
RP005 | RP821 | gene:17555088 | gene:17555890 | Unknown. | Unknown; Belongs to the UbiD family. | 0.555 |
RP006 | RP005 | gene:17555089 | gene:17555088 | Unknown. | Unknown. | 0.999 |
RP006 | RP561 | gene:17555089 | gene:17555641 | Unknown. | Unknown. | 0.593 |
RP006 | RP680 | gene:17555089 | gene:17555757 | Unknown. | UBIQUINONE/MENAQUINONE BIOSYNTHESIS METHLYTRANSFERASE UBIE (ubiE); Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | 0.560 |
RP006 | RP686 | gene:17555089 | gene:17555763 | Unknown. | 4-HYDROXYBENZOATE OCTAPRENYLTRANSFERASE (ubiA); Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.453 |
RP006 | RP821 | gene:17555089 | gene:17555890 | Unknown. | Unknown; Belongs to the UbiD family. | 0.555 |
RP541 | RP686 | gene:17555621 | gene:17555763 | 3-OCTAPRENYL-4-HYDROXYBENZOATE CARBOXY-LYASE (ubiX); Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 4-HYDROXYBENZOATE OCTAPRENYLTRANSFERASE (ubiA); Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.951 |
RP541 | RP821 | gene:17555621 | gene:17555890 | 3-OCTAPRENYL-4-HYDROXYBENZOATE CARBOXY-LYASE (ubiX); Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | Unknown; Belongs to the UbiD family. | 0.984 |
RP561 | RP005 | gene:17555641 | gene:17555088 | Unknown. | Unknown. | 0.593 |
RP561 | RP006 | gene:17555641 | gene:17555089 | Unknown. | Unknown. | 0.593 |
RP561 | RP680 | gene:17555641 | gene:17555757 | Unknown. | UBIQUINONE/MENAQUINONE BIOSYNTHESIS METHLYTRANSFERASE UBIE (ubiE); Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | 0.939 |
RP561 | RP686 | gene:17555641 | gene:17555763 | Unknown. | 4-HYDROXYBENZOATE OCTAPRENYLTRANSFERASE (ubiA); Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.711 |
RP561 | RP821 | gene:17555641 | gene:17555890 | Unknown. | Unknown; Belongs to the UbiD family. | 0.701 |
RP680 | RP005 | gene:17555757 | gene:17555088 | UBIQUINONE/MENAQUINONE BIOSYNTHESIS METHLYTRANSFERASE UBIE (ubiE); Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | Unknown. | 0.560 |
RP680 | RP006 | gene:17555757 | gene:17555089 | UBIQUINONE/MENAQUINONE BIOSYNTHESIS METHLYTRANSFERASE UBIE (ubiE); Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | Unknown. | 0.560 |
RP680 | RP561 | gene:17555757 | gene:17555641 | UBIQUINONE/MENAQUINONE BIOSYNTHESIS METHLYTRANSFERASE UBIE (ubiE); Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | Unknown. | 0.939 |
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