STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pelACell division protein pelota homolog (pelA); May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity. (344 aa)    
Predicted Functional Partners:
rpl15E
LSU ribosomal protein L15E (rpl15E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL15 family.
 
 
   0.906
rps6E
SSU ribosomal protein S6E (rps6E); Hit to one end of protein, other domains not recognized; Translation, Ribosomal Proteins.
 
 
 
 0.902
SSO0287
RNase L inhibitor; Central Intermediary Metabolism, RNA modification.
 
 
 0.901
rps3AE
SSU ribosomal protein S3AE (rps3AE); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eS1 family.
  
 
   0.884
tuF-1
Elongation factor 1-alpha (elongation factor tu) (EF-tu) (tuF-1); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
   
 
 0.861
rpl19E
LSU ribosomal protein L19E (rpl19E); Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family.
 
 
 
 0.854
rpl21E
LSU ribosomal protein L21E (rpl21E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL21 family.
 
 
   0.848
rpl30E
LSU ribosomal protein L30E (rpl30E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL30 family.
 
 
   0.847
rpl18E
LSU ribosomal protein L18E (rpl18E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL18 family.
  
 
 
 0.843
rps4E
SSU ribosomal protein S4E (rps4E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eS4 family.
 
 
   0.842
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.