STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSO0094Conserved hypothetical protein; Catalyzes the dephosphorylation of 2-phosphoglycolate. (228 aa)    
Predicted Functional Partners:
glcD
Glycolate oxidase glcD subunit. (glcD); Energy Metabolism.
    
 0.904
gltX
Glutamyl-tRNA synthetase (gltX); Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).
  
    0.857
SSO0095
Conserved hypothetical protein; First part 5S rRNA second part probably unidentified r protein.
     
 0.855
SSO0481
Hypothetical protein; Phosphoglycolate phosphatase homology.
 
  
 0.811
nagD-like
Phosphatase, putative (nagD-like); Similarity with nag-operon (glucosamine-6P-conversion; E.coli) nagD gene; Central Intermediary Metabolism.
     
 0.712
SSO2453
Conserved hypothetical protein; Putative protein tyrosine phosphatase (PTPase) (EC 3.1.3.48). Similar to PH1732, PAB0279, DR2161.
   
 
 0.669
acyP
Acylphosphatase; Lipid metabolism; Belongs to the acylphosphatase family.
     
 0.624
rpl7AE
LSU ribosomal protein L7AE (rpl7AE); Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs; Belongs to the eukaryotic ribosomal protein eL8 family.
  
   0.616
SSO2281
Conserved hypothetical protein; Involved in the synthesis of UDP-N-acetylgalactosamine (UDP- GalNAc). Catalyzes the conversion of glucosamine-6-phosphate (GlcN-6-P) to galactosamine-6-phosphate (GalN-6-P). Belongs to the PGI/PMI family.
  
  
 0.451
map
Methionine aminopeptidase 2; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase archaeal type 2 subfamily.
  
    0.450
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.