STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps8ELSU ribosomal protein S8E (rps8E); Translation, Ribosomal Proteins. (133 aa)    
Predicted Functional Partners:
SSO0625
GTP-binding protein; Uncategorized.
   
 
 0.999
rpl30AB
LSU ribosomal protein L30AB (rpl30AB); Translation, Ribosomal Proteins.
  
 
 0.998
rpl23AB
LSU ribosomal protein L23AB (rpl23AB); Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family.
   
 
 0.998
rpl7AE
LSU ribosomal protein L7AE (rpl7AE); Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs; Belongs to the eukaryotic ribosomal protein eL8 family.
  
 
 0.997
rplp0
LSU acidic ribosomal protein P0 homolog (rplp0); Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.
  
 
 0.997
rps19E
SSU ribosomal protein S19E (rps19E); May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.
  
 0.997
rpl31E
LSU ribosomal protein L31E (rpl31E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL31 family.
   
 
 0.997
rpl21E
LSU ribosomal protein L21E (rpl21E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL21 family.
  
 
 0.996
rps9AB
SSU ribosomal protein S9AB (rps9AB); Translation, Ribosomal Proteins; Belongs to the universal ribosomal protein uS9 family.
   
 0.995
rpl18E
LSU ribosomal protein L18E (rpl18E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL18 family.
  
 
 0.995
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.