STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSO0195Membrane conserved hypothetical protein; Putative fibronectin-binding protein. Similarity with PAB1903, PH1465, APE1611, MTH1907, Ta1418, MJ1625, AF2038; Cell Envelope, Membranes. (609 aa)    
Predicted Functional Partners:
rpl15AB
LSU ribosomal protein L15AB (rpl15AB); Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
  
 
   0.884
rpl24AB
LSU ribosomal protein L24AB (rpl24AB); One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
 
 
   0.827
rplp0
LSU acidic ribosomal protein P0 homolog (rplp0); Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.
 
 
 
 0.820
rpl22AB
LSU ribosomal protein L22AB (rpl22AB); This protein binds specifically to 23S rRNA. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.
 
 
   0.818
rpl3AB
LSU ribosomal protein L3AB (rpl3AB); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.
 
 
 
 0.802
rpl23AB
LSU ribosomal protein L23AB (rpl23AB); Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family.
 
 
   0.797
rpl6AB
LSU ribosomal protein L6AB (rpl6AB); This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
  
 
   0.794
SSO0197
Conserved hypothetical protein; Similarity with APE1602,AF2426, MJ1073, PAB1013, PH0512.
 
     0.791
rpl30AB
LSU ribosomal protein L30AB (rpl30AB); Translation, Ribosomal Proteins.
  
 
   0.790
SSO1739
Conserved hypothetical protein.
  
  
 0.790
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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