STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ocd-like1Ornithine cyclodeaminase related protein (ocd-like1); Amino Acid Biosynthesis, Aromatic amino acids. (309 aa)    
Predicted Functional Partners:
ocd-like2
Ornithine cyclodeaminase related protein (ocd-like2); Amino Acid Biosynthesis.
  
  
 
0.926
soxB-like-2
Sarcosine oxidase, subunit beta (soxB-like); Amino Acid Biosynthesis, Serine.
 
  
 0.530
cysM
Cysteine synthase B (cysM); Amino Acid Biosynthesis.
  
  
 0.511
SSO0379
Hypothetical protein; Hits to only one domain.
       0.508
tdcB
Threonine dehydratase catabolic (threonine deaminase) (tdcB); Amino Acid Biosynthesis, Aspartate.
 
  
 0.453
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.