STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pqqE-1Coenzyme PQQ synthesis protein E (pqqE-1); Cofactor Biosynthesis, Quinones. (361 aa)    
Predicted Functional Partners:
SSO0548
Multidrug resistance related protein; Transport.
  
    0.728
nirJ-like
Heme biosynthesis related protein (nirJ-like); Only one domain shows homology; Cofactor Biosynthesis, Heme.
  
     0.687
SSO2309
PpqE-type; Cofactor Biosynthesis.
  
     0.670
moaE
Cofactor Biosynthesis, Molybdopterin.
  
  
 0.585
nirD
Weak similarity with nirD heme biosynthesis protein homologs; Cofactor Biosynthesis, Heme.
 
  
 0.454
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.