Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SSO0429 | SSO1046 | SSO0429 | SSO1046 | Hypothetical protein. | Hypothetical ATP/GTP binding protein. | 0.799 |
SSO0429 | atpA | SSO0429 | SSO0563 | Hypothetical protein. | ATP synthase subunit A (atpA); Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit; Belongs to the ATPase alpha/beta chains family. | 0.999 |
SSO0429 | atpB | SSO0429 | SSO0564 | Hypothetical protein. | ATP synthase subunit B (atpB); Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit. | 0.999 |
SSO0429 | atpD | SSO0429 | SSO0566 | Hypothetical protein. | ATP synthase subunit D (atpD); Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
SSO0429 | atpE | SSO0429 | SSO0561 | Hypothetical protein. | ATP synthase subunit E (atpE); Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
SSO0429 | atpF | SSO0429 | SSO0560 | Hypothetical protein. | ATP synthase subunit F (atpF); Energy Metabolism, ATP-Proton Motive Force. | 0.999 |
SSO0429 | atpI | SSO0429 | SSO0559 | Hypothetical protein. | ATP synthase subunit 1 (atpI); Produces ATP from ADP in the presence of a proton gradient across the membrane; Belongs to the V-ATPase 116 kDa subunit family. | 0.999 |
SSO0429 | atpK | SSO0429 | SSO0567 | Hypothetical protein. | ATP synthase subunit K (atpK); Energy Metabolism, ATP-Proton Motive Force; Belongs to the V-ATPase proteolipid subunit family. | 0.999 |
SSO1046 | SSO0429 | SSO1046 | SSO0429 | Hypothetical ATP/GTP binding protein. | Hypothetical protein. | 0.799 |
SSO1046 | atpA | SSO1046 | SSO0563 | Hypothetical ATP/GTP binding protein. | ATP synthase subunit A (atpA); Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit; Belongs to the ATPase alpha/beta chains family. | 0.792 |
SSO1046 | atpB | SSO1046 | SSO0564 | Hypothetical ATP/GTP binding protein. | ATP synthase subunit B (atpB); Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit. | 0.819 |
SSO1046 | atpD | SSO1046 | SSO0566 | Hypothetical ATP/GTP binding protein. | ATP synthase subunit D (atpD); Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.759 |
SSO1046 | atpE | SSO1046 | SSO0561 | Hypothetical ATP/GTP binding protein. | ATP synthase subunit E (atpE); Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.821 |
SSO1046 | atpF | SSO1046 | SSO0560 | Hypothetical ATP/GTP binding protein. | ATP synthase subunit F (atpF); Energy Metabolism, ATP-Proton Motive Force. | 0.740 |
SSO1046 | atpI | SSO1046 | SSO0559 | Hypothetical ATP/GTP binding protein. | ATP synthase subunit 1 (atpI); Produces ATP from ADP in the presence of a proton gradient across the membrane; Belongs to the V-ATPase 116 kDa subunit family. | 0.761 |
SSO1046 | atpK | SSO1046 | SSO0567 | Hypothetical ATP/GTP binding protein. | ATP synthase subunit K (atpK); Energy Metabolism, ATP-Proton Motive Force; Belongs to the V-ATPase proteolipid subunit family. | 0.772 |
atpA | SSO0429 | SSO0563 | SSO0429 | ATP synthase subunit A (atpA); Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit; Belongs to the ATPase alpha/beta chains family. | Hypothetical protein. | 0.999 |
atpA | SSO1046 | SSO0563 | SSO1046 | ATP synthase subunit A (atpA); Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit; Belongs to the ATPase alpha/beta chains family. | Hypothetical ATP/GTP binding protein. | 0.792 |
atpA | atpB | SSO0563 | SSO0564 | ATP synthase subunit A (atpA); Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit; Belongs to the ATPase alpha/beta chains family. | ATP synthase subunit B (atpB); Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit. | 0.999 |
atpA | atpD | SSO0563 | SSO0566 | ATP synthase subunit A (atpA); Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit; Belongs to the ATPase alpha/beta chains family. | ATP synthase subunit D (atpD); Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
page 1 of 5