STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSO0750Conserved hypothetical protein. (208 aa)    
Predicted Functional Partners:
rpl21E
LSU ribosomal protein L21E (rpl21E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL21 family.
 
  
 0.861
rps3AE
SSU ribosomal protein S3AE (rps3AE); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eS1 family.
 
     0.838
SSO0748
Conserved hypothetical protein.
 
     0.800
erm/ksgA
rRNA adenine N-6-methyltransferase (erm/ksgA); Multiple homologs; Translation, RNA modification; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
     
 0.798
rpoF
DNA-directed RNA polymerase, subunit F (rpoF); Transcription.
     
 0.791
SSO0747
Conserved hypothetical protein.
 
     0.775
ribK
Hypothetical protein; Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN); Belongs to the archaeal riboflavin kinase family.
  
   
 0.703
SSO0745
Sugar phosphate nucleotydyl transferase; Cell Envelope, Surface polysaccharides and lipopolysaccharides.
 
     0.702
cca
tRNA nucleotidyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.
 
   
 0.702
rpl18E
LSU ribosomal protein L18E (rpl18E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL18 family.
 
     0.701
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.