STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfbD-1dTDP-4-dehydrorhamnose reductase (rfbD-1); Cell Envelope, Surface polysaccharides and lipopolysaccharides. (226 aa)    
Predicted Functional Partners:
SSO0831
Sugar phosphate nucleotydyl transferase; Cell Envelope, Surface polysaccharides and lipopolysaccharides.
 
  
 0.953
rfbB-1
dTDP-Glucose 4,6-dehydratase (rfbB-1); Energy Metabolism, Sugar metabolism.
 
  
 0.951
rfbC-1
dTDP-4-dehydrorhamnose 3,5 epimerase (rfbC-1); Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.898
rfbC-2
dTDP-4-dehydrorhamnose 3,5 epimerase (rfbC-2); Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.827
SSO1782
Sugar phosphate nucleotydyl transferase; Cell Envelope, Surface polysaccharides and lipopolysaccharides.
 
  
 0.802
rfbB-2
dTDP-Glucose 4,6-dehydratase (rfbB-2); Energy Metabolism, Sugar metabolism.
 
  
 0.796
rfbB-3
dTDP-Glucose 4,6-dehydratase (rfbB-3); Multicopy. Similar to SSO0830, SSO1734; Energy Metabolism, Sugar metabolism.
 
  
 0.795
hemL
Glutamate-1-semialdehyde aminotransferase (hemL); Cofactor Biosynthesis; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily.
  
    0.501
dcD-1
Deoxycytidine triphosphate deaminase (dcD-1); Catalyzes the deamination of dCTP to dUTP.
   
    0.491
dcD-2
Deoxycytidine triphosphate deaminase (dcD-2); Pyrimidines.
   
    0.491
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.