STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSO0909AAA family ATPase, p60 katanin; Belongs to the AAA family; Cellular Processes. (372 aa)    
Predicted Functional Partners:
SSO0910
Conserved hypothetical protein; Sim ilar to APE0143, APE0962.
   
 0.994
SSO0451
Conserved hypothetical protein.
   
 0.878
SSO0881
Conserved hypothetical protein; Similar to APE0143.
   
 0.870
SSO0619
Hypothetical protein.
   
 0.847
SSO0911
Conserved hypothetical protein; Similar to APE0145.
     
 0.845
SSO3012
ABC transporter, ATP binding protein; Transport.
 
 0.799
rpl40E
LSU ribosomal protein L40E (rpl40E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL40 family.
  
 0.756
SSO1046
Hypothetical ATP/GTP binding protein.
 
 
 0.751
pcnA-like
Proliferating cell nuclear antigen putative homolog (PCNA-like) (pcnA-like); One of the sliding clamp subunits that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase to DNA during high-speed replication. Heterotrimer stimulates the Holliday junction resolvase Hjc. DNA polymerase I, DNA ligase and the flap endonuclease may be constitutively associated with the PCNA heterotrimer forming a scanning complex able to couple DNA synthesis and Okazaki fragment maturation.
 
 
 0.687
rfc
Activator 1, replication factor C, small subunit (rfc); Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA. The complex possesses DNA-dependent ATPase activity; Belongs to the activator 1 small subunits family. RfcS subfamily.
  
 0.636
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.