Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SSO0980 | SSO0983 | SSO0980 | SSO0983 | Transposase ISC1217. | Hypothetical protein. | 0.475 |
SSO0980 | SSO1088 | SSO0980 | SSO1088 | Transposase ISC1217. | Conserved hypothetical protein. | 0.612 |
SSO0980 | SSO1089 | SSO0980 | SSO1089 | Transposase ISC1217. | Hypothetical protein. | 0.651 |
SSO0980 | pyK | SSO0980 | SSO0981 | Transposase ISC1217. | Pyruvate kinase (pyK); Energy Metabolism, Glycolysis; Belongs to the pyruvate kinase family. | 0.475 |
SSO0980 | thiF | SSO0980 | SSO0298 | Transposase ISC1217. | Thiamine biosynthesis protein related protein (thiF); Cofactor Biosynthesis, Thiamine. | 0.651 |
SSO0980 | tkt-1 | SSO0980 | SSO0297 | Transposase ISC1217. | Transketolase, N-terminal section (tkt-1); Energy Metabolism, Sugar metabolism. | 0.651 |
SSO0983 | SSO0980 | SSO0983 | SSO0980 | Hypothetical protein. | Transposase ISC1217. | 0.475 |
SSO0983 | pyK | SSO0983 | SSO0981 | Hypothetical protein. | Pyruvate kinase (pyK); Energy Metabolism, Glycolysis; Belongs to the pyruvate kinase family. | 0.787 |
SSO1088 | SSO0980 | SSO1088 | SSO0980 | Conserved hypothetical protein. | Transposase ISC1217. | 0.612 |
SSO1088 | SSO1089 | SSO1088 | SSO1089 | Conserved hypothetical protein. | Hypothetical protein. | 0.917 |
SSO1088 | thiF | SSO1088 | SSO0298 | Conserved hypothetical protein. | Thiamine biosynthesis protein related protein (thiF); Cofactor Biosynthesis, Thiamine. | 0.651 |
SSO1088 | tkt-1 | SSO1088 | SSO0297 | Conserved hypothetical protein. | Transketolase, N-terminal section (tkt-1); Energy Metabolism, Sugar metabolism. | 0.654 |
SSO1089 | SSO0980 | SSO1089 | SSO0980 | Hypothetical protein. | Transposase ISC1217. | 0.651 |
SSO1089 | SSO1088 | SSO1089 | SSO1088 | Hypothetical protein. | Conserved hypothetical protein. | 0.917 |
SSO1089 | thiF | SSO1089 | SSO0298 | Hypothetical protein. | Thiamine biosynthesis protein related protein (thiF); Cofactor Biosynthesis, Thiamine. | 0.727 |
SSO1089 | tkt-1 | SSO1089 | SSO0297 | Hypothetical protein. | Transketolase, N-terminal section (tkt-1); Energy Metabolism, Sugar metabolism. | 0.736 |
pyK | SSO0980 | SSO0981 | SSO0980 | Pyruvate kinase (pyK); Energy Metabolism, Glycolysis; Belongs to the pyruvate kinase family. | Transposase ISC1217. | 0.475 |
pyK | SSO0983 | SSO0981 | SSO0983 | Pyruvate kinase (pyK); Energy Metabolism, Glycolysis; Belongs to the pyruvate kinase family. | Hypothetical protein. | 0.787 |
pyK | tkt-1 | SSO0981 | SSO0297 | Pyruvate kinase (pyK); Energy Metabolism, Glycolysis; Belongs to the pyruvate kinase family. | Transketolase, N-terminal section (tkt-1); Energy Metabolism, Sugar metabolism. | 0.824 |
thiF | SSO0980 | SSO0298 | SSO0980 | Thiamine biosynthesis protein related protein (thiF); Cofactor Biosynthesis, Thiamine. | Transposase ISC1217. | 0.651 |
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