STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccatRNA nucleotidyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. (412 aa)    
Predicted Functional Partners:
ThpR
Conserved hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.
 
     0.879
thiF
Thiamine biosynthesis protein related protein (thiF); Cofactor Biosynthesis, Thiamine.
  
 
 0.853
SSO1038
Conserved hypothetical protein; Similarity with APE1790, PH1307.
       0.852
adkA-like
Adenylate kinase related protein (adkA-like); Purines; Belongs to the UPF0200 family.
 
     0.804
SSO1042
Conserved hypothetical protein; Belongs to the UPF0201 family.
       0.723
SSO0750
Conserved hypothetical protein.
 
   
 0.702
nusG
Transcription termination antitermination factor (nusG); Stimulates transcription elongation; Belongs to the archaeal Spt5 family.
  
     0.672
rpl18E
LSU ribosomal protein L18E (rpl18E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL18 family.
  
     0.667
dnaG
Bacterial-like DNA primase (dnaG); RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Can use NTPs but not dNTPs. Binds DNA. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine- rich transcripts and the exosome. Belongs to the archaeal DnaG primase family.
 
   
 0.667
SSO0872
Conserved hypothetical protein; Involved in DNA damage repair.
  
     0.597
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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