Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SSO1173 | SSO1174 | SSO1173 | SSO1174 | Amino acid permease related protein; Transport, Cell membrane transport. | Na(+)/Ca(2+) exchanging protein related; Transport. | 0.697 |
SSO1173 | SSO1175 | SSO1173 | SSO1175 | Amino acid permease related protein; Transport, Cell membrane transport. | Hypothetical protein; Multicopy. | 0.438 |
SSO1174 | SSO1173 | SSO1174 | SSO1173 | Na(+)/Ca(2+) exchanging protein related; Transport. | Amino acid permease related protein; Transport, Cell membrane transport. | 0.697 |
SSO1174 | SSO1175 | SSO1174 | SSO1175 | Na(+)/Ca(2+) exchanging protein related; Transport. | Hypothetical protein; Multicopy. | 0.505 |
SSO1174 | arsB | SSO1174 | SSO0144 | Na(+)/Ca(2+) exchanging protein related; Transport. | Arsenite transport protein (arsB); Transport, Cell membrane transport. | 0.464 |
SSO1174 | moaE | SSO1174 | SSO2394 | Na(+)/Ca(2+) exchanging protein related; Transport. | Cofactor Biosynthesis, Molybdopterin. | 0.647 |
SSO1174 | pcm | SSO1174 | SSO2599 | Na(+)/Ca(2+) exchanging protein related; Transport. | L-isoaspartyl protein carboxyl methyltransferase (pcm); Cellular Processes. | 0.423 |
SSO1175 | SSO1173 | SSO1175 | SSO1173 | Hypothetical protein; Multicopy. | Amino acid permease related protein; Transport, Cell membrane transport. | 0.438 |
SSO1175 | SSO1174 | SSO1175 | SSO1174 | Hypothetical protein; Multicopy. | Na(+)/Ca(2+) exchanging protein related; Transport. | 0.505 |
arsB | SSO1174 | SSO0144 | SSO1174 | Arsenite transport protein (arsB); Transport, Cell membrane transport. | Na(+)/Ca(2+) exchanging protein related; Transport. | 0.464 |
moaE | SSO1174 | SSO2394 | SSO1174 | Cofactor Biosynthesis, Molybdopterin. | Na(+)/Ca(2+) exchanging protein related; Transport. | 0.647 |
pcm | SSO1174 | SSO2599 | SSO1174 | L-isoaspartyl protein carboxyl methyltransferase (pcm); Cellular Processes. | Na(+)/Ca(2+) exchanging protein related; Transport. | 0.423 |