STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
citECitryl-CoA lyase beta subunit homolog (citE); Energy Metabolism. (269 aa)    
Predicted Functional Partners:
SSO3144
Carnitine dehydratase, putative; Energy Metabolism.
 
  
 0.936
SSO0212
Conserved hypothetical protein; Similarity with MJ0227, MTH743, PAB0313,APE1715, PH1702.
  
  
 0.899
caiB
L-carnitine dehydratase, putative (caiB); Energy Metabolism.
 
  
 0.798
SSO1255
Hits to hypothetical transcriptional regulators; Transcription, RNA polymerase and transcription factors.
     
 0.795
sdhA
Succinate dehydrogenase subunit A (sdhA); Flavoprotein subunit; Energy Metabolism, Electron transport.
  
  
 0.669
SSO2586
Conserved hypothetical protein; Belongs To The MMGE / PRPD family. Similar to APE2147.
  
  
 0.643
sqdB-2
L-lactate dehydrogenase (sqdB); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily.
  
  
 0.605
SSO3136
Regulatory protein, putative; Resembles Monoamine oxidase regulatory protein; Regulation.
 
  
 0.586
mcmA2
Methylmalonyl-CoA mutase, alpha-subunit, chain B (mcmA2); Cellular Processes, Detoxification.
  
  
 0.557
acsA-4-2
Acetyl-CoA synthetase (acetate-CoA ligase) carboxy-end fragment (acsA-4); Possible frameshift with SSO2020 and SSO9518; Lipid metabolism.
    
 0.552
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.