Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SSO1386 | SSO1699 | Second ORF in transposon ISC1190. | Third ORF in transposon ISC1491. | 0.437 |
SSO1386 | SSO7893 | Second ORF in transposon ISC1190. | First ORF in transposon ISC1190. | 0.701 |
SSO1386 | SSO7896 | Second ORF in transposon ISC1190. | Second part of one of two inversely orientated ORFs in a partial ISC1043; The second half is missing from this copy (SSO8198 and SSO8196) (but may have connection to SSO1371). | 0.404 |
SSO1699 | SSO1386 | Third ORF in transposon ISC1491. | Second ORF in transposon ISC1190. | 0.437 |
SSO7893 | SSO1386 | First ORF in transposon ISC1190. | Second ORF in transposon ISC1190. | 0.701 |
SSO7893 | SSO7896 | First ORF in transposon ISC1190. | Second part of one of two inversely orientated ORFs in a partial ISC1043; The second half is missing from this copy (SSO8198 and SSO8196) (but may have connection to SSO1371). | 0.438 |
SSO7896 | SSO1386 | Second part of one of two inversely orientated ORFs in a partial ISC1043; The second half is missing from this copy (SSO8198 and SSO8196) (but may have connection to SSO1371). | Second ORF in transposon ISC1190. | 0.404 |
SSO7896 | SSO7893 | Second part of one of two inversely orientated ORFs in a partial ISC1043; The second half is missing from this copy (SSO8198 and SSO8196) (but may have connection to SSO1371). | First ORF in transposon ISC1190. | 0.438 |