STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TnpATransposase, putative; Similar to TM1832, TM0777. Amino-end fragment in SSO9043; Uncategorized. (133 aa)    
Predicted Functional Partners:
SSO1475
Transposase ISC1476.
 
  
 0.879
SSO1830
First ORF in transposon ISC1904.
     
 0.809
SSO2943
First ORF in transposon ISC1904.
     
 0.809
xerC/D
XerC/D integrase-recombinase protein (xerC/D); Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Probably involved in the resolution of chromosome dimers. Binds to the dif site. Belongs to the 'phage' integrase family. XerA subfamily.
      
 0.555
mobB
Molybdopterin-guanine dinucleotide biosynthesis protein B (mobB); Cofactor Biosynthesis, Molybdopterin.
     
 0.550
SSO0842
Transposase ISC1476.
 
  
 0.478
SSO0801
Transposase ISC1476.
 
  
 0.434
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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