STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSO1475Transposase ISC1476. (416 aa)    
Predicted Functional Partners:
TnpA
Transposase, putative; Similar to TM1832, TM0777. Amino-end fragment in SSO9043; Uncategorized.
 
  
 0.879
SSO1974
Conserved hypothetical protein; Putative transposase. Similarity with MJ0751, PAB1802, PAB1452, PAB2077, ORF 406 from pNOB8, TM0135, TM0047,TM1026.
  
     0.482
SSO0008
Transposase, probably IS605-TnpB family; Cannot be named yet because only one copy exists and therfore the length is unknown.
  
     0.451
SSO1829
Second ORF in transposon ISC1904.
  
     0.434
SSO1182
Second ORF in transposon ISC1904.
  
     0.428
SSO3153
Second ORF in transposon ISC1904.
  
     0.417
SSO1336
Second ORF in transposon ISC1904.
  
     0.416
SSO1072
Second ORF in transposon ISC1904.
  
     0.415
SSO3172
Second ORF in transposon ISC1904.
  
     0.415
SSO1498
Second ORF in transposon ISC1904.
  
     0.410
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
Server load: medium (80%) [HD]