Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SSO0008 | SSO1336 | SSO0008 | SSO1336 | Transposase, probably IS605-TnpB family; Cannot be named yet because only one copy exists and therfore the length is unknown. | Second ORF in transposon ISC1904. | 0.633 |
SSO0008 | SSO1475 | SSO0008 | SSO1475 | Transposase, probably IS605-TnpB family; Cannot be named yet because only one copy exists and therfore the length is unknown. | Transposase ISC1476. | 0.451 |
SSO0008 | SSO1498 | SSO0008 | SSO1498 | Transposase, probably IS605-TnpB family; Cannot be named yet because only one copy exists and therfore the length is unknown. | Second ORF in transposon ISC1904. | 0.620 |
SSO0008 | SSO1829 | SSO0008 | SSO1829 | Transposase, probably IS605-TnpB family; Cannot be named yet because only one copy exists and therfore the length is unknown. | Second ORF in transposon ISC1904. | 0.626 |
SSO0008 | SSO1974 | SSO0008 | SSO1974 | Transposase, probably IS605-TnpB family; Cannot be named yet because only one copy exists and therfore the length is unknown. | Conserved hypothetical protein; Putative transposase. Similarity with MJ0751, PAB1802, PAB1452, PAB2077, ORF 406 from pNOB8, TM0135, TM0047,TM1026. | 0.500 |
SSO1072 | SSO1475 | SSO1072 | SSO1475 | Second ORF in transposon ISC1904. | Transposase ISC1476. | 0.415 |
SSO1182 | SSO1475 | SSO1182 | SSO1475 | Second ORF in transposon ISC1904. | Transposase ISC1476. | 0.428 |
SSO1336 | SSO0008 | SSO1336 | SSO0008 | Second ORF in transposon ISC1904. | Transposase, probably IS605-TnpB family; Cannot be named yet because only one copy exists and therfore the length is unknown. | 0.633 |
SSO1336 | SSO1475 | SSO1336 | SSO1475 | Second ORF in transposon ISC1904. | Transposase ISC1476. | 0.416 |
SSO1475 | SSO0008 | SSO1475 | SSO0008 | Transposase ISC1476. | Transposase, probably IS605-TnpB family; Cannot be named yet because only one copy exists and therfore the length is unknown. | 0.451 |
SSO1475 | SSO1072 | SSO1475 | SSO1072 | Transposase ISC1476. | Second ORF in transposon ISC1904. | 0.415 |
SSO1475 | SSO1182 | SSO1475 | SSO1182 | Transposase ISC1476. | Second ORF in transposon ISC1904. | 0.428 |
SSO1475 | SSO1336 | SSO1475 | SSO1336 | Transposase ISC1476. | Second ORF in transposon ISC1904. | 0.416 |
SSO1475 | SSO1498 | SSO1475 | SSO1498 | Transposase ISC1476. | Second ORF in transposon ISC1904. | 0.410 |
SSO1475 | SSO1829 | SSO1475 | SSO1829 | Transposase ISC1476. | Second ORF in transposon ISC1904. | 0.434 |
SSO1475 | SSO1974 | SSO1475 | SSO1974 | Transposase ISC1476. | Conserved hypothetical protein; Putative transposase. Similarity with MJ0751, PAB1802, PAB1452, PAB2077, ORF 406 from pNOB8, TM0135, TM0047,TM1026. | 0.482 |
SSO1475 | SSO3153 | SSO1475 | SSO3153 | Transposase ISC1476. | Second ORF in transposon ISC1904. | 0.417 |
SSO1475 | SSO3172 | SSO1475 | SSO3172 | Transposase ISC1476. | Second ORF in transposon ISC1904. | 0.415 |
SSO1475 | TnpA | SSO1475 | SSO1474 | Transposase ISC1476. | Transposase, putative; Similar to TM1832, TM0777. Amino-end fragment in SSO9043; Uncategorized. | 0.879 |
SSO1498 | SSO0008 | SSO1498 | SSO0008 | Second ORF in transposon ISC1904. | Transposase, probably IS605-TnpB family; Cannot be named yet because only one copy exists and therfore the length is unknown. | 0.620 |
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