Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SSO1497 | SSO1498 | First ORF in transposon ISC1904. | Second ORF in transposon ISC1904. | 0.578 |
SSO1497 | SSO1964 | First ORF in transposon ISC1904. | First ORF in transposon ISC1913. | 0.687 |
SSO1497 | SSO9270 | First ORF in transposon ISC1904. | Second ORF in partial transposon ISC1913; ISC1913 is split by ISC1190 (SSO1926) the first ORF is SSO1927. | 0.671 |
SSO1497 | SSO9368 | First ORF in transposon ISC1904. | Second ORF in transposon ISC1913; ISC1913 is split by ISC1190 (SSO1966) the first ORF is SSO1964 and the third is SSO1967. | 0.678 |
SSO1498 | SSO1497 | Second ORF in transposon ISC1904. | First ORF in transposon ISC1904. | 0.578 |
SSO1964 | SSO1497 | First ORF in transposon ISC1913. | First ORF in transposon ISC1904. | 0.687 |
SSO1964 | SSO9270 | First ORF in transposon ISC1913. | Second ORF in partial transposon ISC1913; ISC1913 is split by ISC1190 (SSO1926) the first ORF is SSO1927. | 0.823 |
SSO1964 | SSO9368 | First ORF in transposon ISC1913. | Second ORF in transposon ISC1913; ISC1913 is split by ISC1190 (SSO1966) the first ORF is SSO1964 and the third is SSO1967. | 0.827 |
SSO9270 | SSO1497 | Second ORF in partial transposon ISC1913; ISC1913 is split by ISC1190 (SSO1926) the first ORF is SSO1927. | First ORF in transposon ISC1904. | 0.671 |
SSO9270 | SSO1964 | Second ORF in partial transposon ISC1913; ISC1913 is split by ISC1190 (SSO1926) the first ORF is SSO1927. | First ORF in transposon ISC1913. | 0.823 |
SSO9368 | SSO1497 | Second ORF in transposon ISC1913; ISC1913 is split by ISC1190 (SSO1966) the first ORF is SSO1964 and the third is SSO1967. | First ORF in transposon ISC1904. | 0.678 |
SSO9368 | SSO1964 | Second ORF in transposon ISC1913; ISC1913 is split by ISC1190 (SSO1966) the first ORF is SSO1964 and the third is SSO1967. | First ORF in transposon ISC1913. | 0.827 |