STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSO1498Second ORF in transposon ISC1904. (400 aa)    
Predicted Functional Partners:
SSO3256
Second ORF in transposon ISC1316; ISC1316 is split by another IS element (SSO1317).
  
     0.639
SSO2123
First ORF in transposon ISC1316.
  
     0.635
SSO0008
Transposase, probably IS605-TnpB family; Cannot be named yet because only one copy exists and therfore the length is unknown.
  
     0.620
SSO1497
First ORF in transposon ISC1904.
  
    0.578
SSO1682
Partial transposase in ISC1316.
  
     0.576
SSO1681
Partial transposase in ISC1316.
  
     0.455
SSO1475
Transposase ISC1476.
  
     0.410
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.