STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSO1545Conserved hypothetical protein; Possibly an ATPase of the AAA superfamily (COG1672, predicted). Similar to SSO2139,SSO2730,SSO2101,SSO1939,SSO1196,SSO1330/SSO3257. (356 aa)    
Predicted Functional Partners:
SSO3066
Arabinose ABC transporter, arabinose binding protein; Albers, S.-V., Elferink,M.G.L., Konings, W.N., Driessen, A.J.M., pers. comm; Transport.
 
     0.647
glcS
Sugar-binding periplasmic protein; Part of the ABC transporter complex GlcSTUV involved in glucose uptake (Probable). Binds glucose. Can also bind galactose and mannose.
 
     0.635
cdc6-3
Cell division control 6/orc1 protein homolog (cdc6-3); Involved in regulation of DNA replication. May play essential roles in origin recognition and cell cycle control of replication. Binds to DNA, with a preference for molecules that contain a bubble, a fork, or a tail. Inhibits the binding of the MCM helicase to the origin DNA and inhibits its DNA helicase activity. Also regulates the DNA polymerase and the nuclease activities of PolB1. Inhibits the DNA- binding activity of Cdc6-1 and Cdc6-2.
      
 0.601
cdc6-1
Cell division control 6/orc1 protein homolog (cdc6-1); Involved in regulation of DNA replication. May play essential roles in origin recognition and cell cycle control of replication. Binds to DNA, with a preference for molecules that contain a bubble, a fork, or a tail. Inhibits the binding of the MCM helicase to the origin DNA and strongly inhibits its DNA helicase activity. Also regulates the DNA polymerase and the nuclease activities of PolB1. Stimulates the DNA-binding activity of Cdc6-3. Belongs to the CDC6/cdc18 family.
      
 0.549
SSO0797
Orf in partial transposon ISC1913.
  
     0.513
SSO1916
Second ORF in transposon ISC1913.
  
     0.505
SSO1967
Third ORF in transposon ISC1913; ISC1913 is split by ISC1190 (SSO1966) the first ORF is SSO1964 and the second is SSO9368.
  
     0.494
SSO2712
Hypothetical protein.
  
     0.493
SSO0604
Conserved hypothetical protein; Related to family 2 Fe-S oxidoreductases. Similarity with PAB1143, PH1949, Ta0906, Ta0288.
  
     0.492
Cmr6
Hypothetical protein.
  
     0.489
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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