STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSO1566Cofactor (heme, PQQ, molybdopterin) biosynthesis; two [FeS] motifs; Cofactor Biosynthesis. (394 aa)    
Predicted Functional Partners:
SSO1567
Conserved hypothetical protein; Metallo-beta-lactamase-related protein.
       0.780
nirJ-like
Heme biosynthesis related protein (nirJ-like); Only one domain shows homology; Cofactor Biosynthesis, Heme.
 
   
 0.545
SSO8380
First ORF in transposon ISC1160.
       0.484
SSO8382
Second ORF in transposon ISC1160.
       0.484
pqqE-5
Coenzyme PQQ synthesis protein E (pqqE-5); Cofactor Biosynthesis, Quinones.
 
   
 0.480
pqqE-2
Coenzyme PQQ synthesis protein E (pqqE-2); Multicopy. Similar to SSO1840; Cofactor Biosynthesis, Quinones.
 
   
 0.476
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.