Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SSO1568 | SSO1569 | SSO1568 | SSO1569 | Hypothetical protein. | Hypothetical protein. | 0.778 |
SSO1568 | SSO1570 | SSO1568 | SSO1570 | Hypothetical protein. | Conserved hypothetical protein; Homology with C-term. domain putative sugar isomerase. | 0.671 |
SSO1569 | SSO1568 | SSO1569 | SSO1568 | Hypothetical protein. | Hypothetical protein. | 0.778 |
SSO1569 | SSO1570 | SSO1569 | SSO1570 | Hypothetical protein. | Conserved hypothetical protein; Homology with C-term. domain putative sugar isomerase. | 0.671 |
SSO1570 | SSO1568 | SSO1570 | SSO1568 | Conserved hypothetical protein; Homology with C-term. domain putative sugar isomerase. | Hypothetical protein. | 0.671 |
SSO1570 | SSO1569 | SSO1570 | SSO1569 | Conserved hypothetical protein; Homology with C-term. domain putative sugar isomerase. | Hypothetical protein. | 0.671 |
SSO1570 | SSO1880 | SSO1570 | SSO1880 | Conserved hypothetical protein; Homology with C-term. domain putative sugar isomerase. | Conserved hypothetical protein; Integral membrane protein. Similarity with AF0266. | 0.404 |
SSO1570 | cobB | SSO1570 | SSO2478 | Conserved hypothetical protein; Homology with C-term. domain putative sugar isomerase. | Transcriptional regulatory protein, Sir2 protein homolog; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form. Deacetylates the N-terminal lysine residue of Alba, the major archaeal chromatin protein and that, in turn, increases Alba's DNA binding affinity, thereby repressing transcription. | 0.536 |
SSO1570 | moaE | SSO1570 | SSO2394 | Conserved hypothetical protein; Homology with C-term. domain putative sugar isomerase. | Cofactor Biosynthesis, Molybdopterin. | 0.449 |
SSO1880 | SSO1570 | SSO1880 | SSO1570 | Conserved hypothetical protein; Integral membrane protein. Similarity with AF0266. | Conserved hypothetical protein; Homology with C-term. domain putative sugar isomerase. | 0.404 |
cobB | SSO1570 | SSO2478 | SSO1570 | Transcriptional regulatory protein, Sir2 protein homolog; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form. Deacetylates the N-terminal lysine residue of Alba, the major archaeal chromatin protein and that, in turn, increases Alba's DNA binding affinity, thereby repressing transcription. | Conserved hypothetical protein; Homology with C-term. domain putative sugar isomerase. | 0.536 |
moaE | SSO1570 | SSO2394 | SSO1570 | Cofactor Biosynthesis, Molybdopterin. | Conserved hypothetical protein; Homology with C-term. domain putative sugar isomerase. | 0.449 |