Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SSO0255 | SSO1589 | SSO0255 | SSO1589 | Nicotinamide mononucleotide adenylyltransferase, putative; Amino-end extention is missing compared to other homologues; Cofactor Biosynthesis, Pyridine nucleotides. | Conserved hypothetical protein; GntR family. | 0.674 |
SSO0255 | cobB | SSO0255 | SSO2478 | Nicotinamide mononucleotide adenylyltransferase, putative; Amino-end extention is missing compared to other homologues; Cofactor Biosynthesis, Pyridine nucleotides. | Transcriptional regulatory protein, Sir2 protein homolog; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form. Deacetylates the N-terminal lysine residue of Alba, the major archaeal chromatin protein and that, in turn, increases Alba's DNA binding affinity, thereby repressing transcription. | 0.733 |
SSO0255 | fur | SSO0255 | SSO2244 | Nicotinamide mononucleotide adenylyltransferase, putative; Amino-end extention is missing compared to other homologues; Cofactor Biosynthesis, Pyridine nucleotides. | Ferric uptake regulation protein (fur); Transport. | 0.403 |
SSO1589 | SSO0255 | SSO1589 | SSO0255 | Conserved hypothetical protein; GntR family. | Nicotinamide mononucleotide adenylyltransferase, putative; Amino-end extention is missing compared to other homologues; Cofactor Biosynthesis, Pyridine nucleotides. | 0.674 |
SSO1589 | SSO1590 | SSO1589 | SSO1590 | Conserved hypothetical protein; GntR family. | Hypothetical protein. | 0.938 |
SSO1589 | SSO1591 | SSO1589 | SSO1591 | Conserved hypothetical protein; GntR family. | Transporter (proton symporter); Transport. | 0.812 |
SSO1589 | SSO1927 | SSO1589 | SSO1927 | Conserved hypothetical protein; GntR family. | First ORF in partial transposon ISC1913. | 0.870 |
SSO1589 | SSO8426 | SSO1589 | SSO8426 | Conserved hypothetical protein; GntR family. | Hypothetical protein. | 0.497 |
SSO1589 | cobB | SSO1589 | SSO2478 | Conserved hypothetical protein; GntR family. | Transcriptional regulatory protein, Sir2 protein homolog; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form. Deacetylates the N-terminal lysine residue of Alba, the major archaeal chromatin protein and that, in turn, increases Alba's DNA binding affinity, thereby repressing transcription. | 0.656 |
SSO1589 | fur | SSO1589 | SSO2244 | Conserved hypothetical protein; GntR family. | Ferric uptake regulation protein (fur); Transport. | 0.485 |
SSO1589 | slaA | SSO1589 | SSO0389 | Conserved hypothetical protein; GntR family. | Hypothetical protein; S-layer large protein. May form the highly ordered outer sheath; Belongs to the Sulfolobales SlaA family. | 0.545 |
SSO1590 | SSO1589 | SSO1590 | SSO1589 | Hypothetical protein. | Conserved hypothetical protein; GntR family. | 0.938 |
SSO1590 | SSO1591 | SSO1590 | SSO1591 | Hypothetical protein. | Transporter (proton symporter); Transport. | 0.812 |
SSO1590 | SSO8426 | SSO1590 | SSO8426 | Hypothetical protein. | Hypothetical protein. | 0.497 |
SSO1591 | SSO1589 | SSO1591 | SSO1589 | Transporter (proton symporter); Transport. | Conserved hypothetical protein; GntR family. | 0.812 |
SSO1591 | SSO1590 | SSO1591 | SSO1590 | Transporter (proton symporter); Transport. | Hypothetical protein. | 0.812 |
SSO1591 | SSO8426 | SSO1591 | SSO8426 | Transporter (proton symporter); Transport. | Hypothetical protein. | 0.497 |
SSO1927 | SSO1589 | SSO1927 | SSO1589 | First ORF in partial transposon ISC1913. | Conserved hypothetical protein; GntR family. | 0.870 |
SSO1927 | slaA | SSO1927 | SSO0389 | First ORF in partial transposon ISC1913. | Hypothetical protein; S-layer large protein. May form the highly ordered outer sheath; Belongs to the Sulfolobales SlaA family. | 0.800 |
SSO8426 | SSO1589 | SSO8426 | SSO1589 | Hypothetical protein. | Conserved hypothetical protein; GntR family. | 0.497 |
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