STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSO1589Conserved hypothetical protein; GntR family. (117 aa)    
Predicted Functional Partners:
SSO1590
Hypothetical protein.
 
   
 0.938
SSO1927
First ORF in partial transposon ISC1913.
      
 0.870
SSO1591
Transporter (proton symporter); Transport.
     
 0.812
SSO0255
Nicotinamide mononucleotide adenylyltransferase, putative; Amino-end extention is missing compared to other homologues; Cofactor Biosynthesis, Pyridine nucleotides.
  
    0.674
cobB
Transcriptional regulatory protein, Sir2 protein homolog; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form. Deacetylates the N-terminal lysine residue of Alba, the major archaeal chromatin protein and that, in turn, increases Alba's DNA binding affinity, thereby repressing transcription.
  
    0.656
slaA
Hypothetical protein; S-layer large protein. May form the highly ordered outer sheath; Belongs to the Sulfolobales SlaA family.
      
 0.545
SSO8426
Hypothetical protein.
       0.497
fur
Ferric uptake regulation protein (fur); Transport.
  
  
 0.485
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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