STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSO1613Best hit: hypothetical protein [Archaeoglobus fulgidus]. (222 aa)    
Predicted Functional Partners:
rps5AB
SSU ribosomal protein S5AB (rps5AB); With S4 and S12 plays an important role in translational accuracy.
    
 0.714
SSO0814
Conserved hypothetical protein.
  
     0.686
SSO1901
Hypothetical protein.
  
     0.678
SSO2218
Conserved hypothetical protein; Similarity with PH0709, PAB0882, MTH1862, MJ1474, AF0385.
  
 0.660
rps24E
SSU ribosomal protein S24E (rps24E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eS24 family.
  
  0.639
crtB
Phytoene synthetase (crtB); Cofactor Biosynthesis, Caretenoid Biosynthesis.
   
 0.634
rps6E
SSU ribosomal protein S6E (rps6E); Hit to one end of protein, other domains not recognized; Translation, Ribosomal Proteins.
  
  0.620
rps3AE
SSU ribosomal protein S3AE (rps3AE); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eS1 family.
   
  0.620
rps4E
SSU ribosomal protein S4E (rps4E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eS4 family.
   
  0.602
rpS13E
SSU ribosomal protein S13E (rpS13E); Close hits to several plant species' 40S ribosomal protein; Translation, Ribosomal Proteins.
  
  0.580
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.