STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tynAAmine oxidase (copper-containing) (tynA); Amino Acid Biosynthesis, Aromatic amino acids; Belongs to the copper/topaquinone oxidase family. (660 aa)    
Predicted Functional Partners:
rpl11AB
LSU ribosomal protein L11AB (rpl11AB); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family.
   
   0.712
sod
Superoxide dismutase [Fe] (sod); Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
   
 
 0.710
SSO0767
Conserved hypothetical protein.
    
 
 0.705
AcnA
Aconitate hydratase; Energy Metabolism, Tri-Carboxylic Acid Cycle.
    
   0.702
xylS
Alpha-xylosidase (xylS); Catalyzes the liberation of alpha-xylose from the non- reducing terminal glucose of xyloglucan oligosaccharides. Has high hydrolytic activity on the disaccharide isoprimeverose. Follows a retaining mechanism of substrate hydrolysis; Belongs to the glycosyl hydrolase 31 family.
   
 
 0.662
malA
Alpha-glucosidase (malA); Major soluble alpha-glucosidase.
   
 
 0.662
rpS13E
SSU ribosomal protein S13E (rpS13E); Close hits to several plant species' 40S ribosomal protein; Translation, Ribosomal Proteins.
    
 
 0.650
rps10AB
SSU ribosomal protein S10AB (rps10AB); Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
   
   0.641
rps5AB
SSU ribosomal protein S5AB (rps5AB); With S4 and S12 plays an important role in translational accuracy.
   
   0.635
rpl6AB
LSU ribosomal protein L6AB (rpl6AB); This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
 
 0.624
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.