Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SSO0506 | SSO2209 | SSO0506 | SSO2209 | Conserved hypothetical protein. | Conserved hypothetical protein; Similar to Ta0565. | 0.633 |
SSO0820 | SSO2209 | SSO0820 | SSO2209 | Conserved hypothetical protein. | Conserved hypothetical protein; Similar to Ta0565. | 0.501 |
SSO2191 | SSO2209 | SSO2191 | SSO2209 | Conserved hypothetical protein; Some similarity with O-linked GlcNAc transferases from M.thermoautotrophicum. TPR-repeat-containing protein. | Conserved hypothetical protein; Similar to Ta0565. | 0.678 |
SSO2191 | SSO2796 | SSO2191 | SSO2796 | Conserved hypothetical protein; Some similarity with O-linked GlcNAc transferases from M.thermoautotrophicum. TPR-repeat-containing protein. | Conserved hypothetical protein; TPR-repeat-containing protein. Some similarity with O-linked GlcNAc transferases. | 0.691 |
SSO2209 | SSO0506 | SSO2209 | SSO0506 | Conserved hypothetical protein; Similar to Ta0565. | Conserved hypothetical protein. | 0.633 |
SSO2209 | SSO0820 | SSO2209 | SSO0820 | Conserved hypothetical protein; Similar to Ta0565. | Conserved hypothetical protein. | 0.501 |
SSO2209 | SSO2191 | SSO2209 | SSO2191 | Conserved hypothetical protein; Similar to Ta0565. | Conserved hypothetical protein; Some similarity with O-linked GlcNAc transferases from M.thermoautotrophicum. TPR-repeat-containing protein. | 0.678 |
SSO2209 | SSO2210 | SSO2209 | SSO2210 | Conserved hypothetical protein; Similar to Ta0565. | Hypothetical protein. | 0.514 |
SSO2209 | SSO2211 | SSO2209 | SSO2211 | Conserved hypothetical protein; Similar to Ta0565. | Conserved hypothetical protein; Similar to AF0577. | 0.516 |
SSO2209 | SSO2710 | SSO2209 | SSO2710 | Conserved hypothetical protein; Similar to Ta0565. | Conserved hypothetical protein. | 0.719 |
SSO2209 | SSO2796 | SSO2209 | SSO2796 | Conserved hypothetical protein; Similar to Ta0565. | Conserved hypothetical protein; TPR-repeat-containing protein. Some similarity with O-linked GlcNAc transferases. | 0.705 |
SSO2209 | SSO2832 | SSO2209 | SSO2832 | Conserved hypothetical protein; Similar to Ta0565. | Conserved hypothetical protein. | 0.621 |
SSO2209 | nucS | SSO2209 | SSO2208 | Conserved hypothetical protein; Similar to Ta0565. | Conserved hypothetical protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.608 |
SSO2209 | ugd | SSO2209 | SSO0810 | Conserved hypothetical protein; Similar to Ta0565. | UDP-glucose 6-dehydrogenase (ugd); Central Intermediary Metabolism. | 0.500 |
SSO2210 | SSO2209 | SSO2210 | SSO2209 | Hypothetical protein. | Conserved hypothetical protein; Similar to Ta0565. | 0.514 |
SSO2210 | SSO2211 | SSO2210 | SSO2211 | Hypothetical protein. | Conserved hypothetical protein; Similar to AF0577. | 0.693 |
SSO2211 | SSO2209 | SSO2211 | SSO2209 | Conserved hypothetical protein; Similar to AF0577. | Conserved hypothetical protein; Similar to Ta0565. | 0.516 |
SSO2211 | SSO2210 | SSO2211 | SSO2210 | Conserved hypothetical protein; Similar to AF0577. | Hypothetical protein. | 0.693 |
SSO2710 | SSO2209 | SSO2710 | SSO2209 | Conserved hypothetical protein. | Conserved hypothetical protein; Similar to Ta0565. | 0.719 |
SSO2796 | SSO2191 | SSO2796 | SSO2191 | Conserved hypothetical protein; TPR-repeat-containing protein. Some similarity with O-linked GlcNAc transferases. | Conserved hypothetical protein; Some similarity with O-linked GlcNAc transferases from M.thermoautotrophicum. TPR-repeat-containing protein. | 0.691 |
page 1 of 2