STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSO2273Conserved hypothetical protein. (138 aa)    
Predicted Functional Partners:
hycG
Formate hydrogenlyase subunit 7 (hycG); Energy Metabolism.
    
   0.587
dapA-1
Dihydrodipicolinate synthase (dapA-1); Amino Acid Biosynthesis, Aspartate.
       0.584
fur
Ferric uptake regulation protein (fur); Transport.
  
  
 0.583
SSO0006
Conserved hypothetical protein; Present in archaea and some bacteria and eukarya, including M. jannaschii, E. coli, B. subtilus, yeast, and human.
 
    0.494
udg1
DNA polymerase phage SPO1 N-terminal domain homolog; Removes uracil bases that are present in DNA as a result of either deamination of cytosine or misincorporation of dUMP instead of dTMP. Can remove uracil from double-stranded DNA containing either a U/G or U/A base pair as well as from single-stranded DNA. Belongs to the uracil-DNA glycosylase (UDG) superfamily. Type 4 (UDGa) family.
       0.478
fabG-5
3-oxoacyl-(acyl carrier protein) reductase (fabG-5); Lipid metabolism.
  
    0.460
SSO3073
Conserved hypothetical protein.
  
  
 0.457
SSO0916
Signal peptidase, putative; Cellular Processes, Intracellular transport.
   
    0.430
SSO2116
Cobalt transport ATP-binding protein (cbiO-2) homolog, putative; ABC transporter, ATP-binding protein; Transport.
  
  
 0.413
SSO0255
Nicotinamide mononucleotide adenylyltransferase, putative; Amino-end extention is missing compared to other homologues; Cofactor Biosynthesis, Pyridine nucleotides.
  
    0.407
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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