STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSO2312Transposon ISC1190. (316 aa)    
Predicted Functional Partners:
SSO0377
Conserved hypothetical protein.
      
 0.611
SSO0588
Conserved hypothetical protein; Similar to SSO0377.
      
 0.611
dys
Deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue.
      
 0.610
xerC/D
XerC/D integrase-recombinase protein (xerC/D); Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Probably involved in the resolution of chromosome dimers. Binds to the dif site. Belongs to the 'phage' integrase family. XerA subfamily.
      
 0.550
TatA
Conserved hypothetical protein.
      
 0.547
SSO0143
SSV1 integrase fragment homolog (orf D-335); Uncategorized.
      
 0.523
SSO2311
One of two inversely orientated ORFs in ISC1043; ISC1043 (sso2311 and sso2314) is disrupted by ISC1190.
       0.418
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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