Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SSO1089 | SSO1091 | SSO1089 | SSO1091 | Hypothetical protein. | Hypothetical protein. | 0.646 |
SSO1089 | SSO2363 | SSO1089 | SSO2363 | Hypothetical protein. | Conserved hypothetical protein; Similar to APE1035. | 0.620 |
SSO1091 | SSO1089 | SSO1091 | SSO1089 | Hypothetical protein. | Hypothetical protein. | 0.646 |
SSO1091 | SSO2363 | SSO1091 | SSO2363 | Hypothetical protein. | Conserved hypothetical protein; Similar to APE1035. | 0.549 |
SSO2360 | SSO2363 | SSO2360 | SSO2363 | Conserved hypothetical protein; Similar to APE1031. | Conserved hypothetical protein; Similar to APE1035. | 0.952 |
SSO2363 | SSO1089 | SSO2363 | SSO1089 | Conserved hypothetical protein; Similar to APE1035. | Hypothetical protein. | 0.620 |
SSO2363 | SSO1091 | SSO2363 | SSO1091 | Conserved hypothetical protein; Similar to APE1035. | Hypothetical protein. | 0.549 |
SSO2363 | SSO2360 | SSO2363 | SSO2360 | Conserved hypothetical protein; Similar to APE1035. | Conserved hypothetical protein; Similar to APE1031. | 0.952 |
SSO2363 | SSO2397 | SSO2363 | SSO2397 | Conserved hypothetical protein; Similar to APE1035. | Conserved hypothetical protein. | 0.712 |
SSO2363 | SSO2869 | SSO2363 | SSO2869 | Conserved hypothetical protein; Similar to APE1035. | NAD-dependent malic enzyme (malate oxidoreductase); Energy Metabolism. | 0.503 |
SSO2363 | htpX-1 | SSO2363 | SSO1859 | Conserved hypothetical protein; Similar to APE1035. | Heat shock protein (htpX-1); Regulation; Belongs to the peptidase M48B family. | 0.518 |
SSO2363 | htpX-2 | SSO2363 | SSO3231 | Conserved hypothetical protein; Similar to APE1035. | Heat shock protein (htpX-2); Regulation; Belongs to the peptidase M48B family. | 0.518 |
SSO2363 | htpX-like | SSO2363 | SSO2694 | Conserved hypothetical protein; Similar to APE1035. | Heat shock protein X, protease htpX homolog, putative (htpX-like); Regulation, Chaperones. | 0.518 |
SSO2363 | metE-1 | SSO2363 | SSO0406 | Conserved hypothetical protein; Similar to APE1035. | 5-methyltetrahydropteroyltriglutamate- homocysteine methyltransferase (metE-1); Amino Acid Biosynthesis. | 0.421 |
SSO2363 | metE-2 | SSO2363 | SSO0407 | Conserved hypothetical protein; Similar to APE1035. | 5-methyltetrahydropteroyltriglutamate- homocysteine methyltransferase (metE-2); Catalyzes the transfer of a methyl group to L-homocysteine resulting in methionine formation. The physiological methyl donor is unknown (By similarity). | 0.454 |
SSO2397 | SSO2363 | SSO2397 | SSO2363 | Conserved hypothetical protein. | Conserved hypothetical protein; Similar to APE1035. | 0.712 |
SSO2397 | SSO2869 | SSO2397 | SSO2869 | Conserved hypothetical protein. | NAD-dependent malic enzyme (malate oxidoreductase); Energy Metabolism. | 0.728 |
SSO2397 | htpX-1 | SSO2397 | SSO1859 | Conserved hypothetical protein. | Heat shock protein (htpX-1); Regulation; Belongs to the peptidase M48B family. | 0.731 |
SSO2397 | htpX-2 | SSO2397 | SSO3231 | Conserved hypothetical protein. | Heat shock protein (htpX-2); Regulation; Belongs to the peptidase M48B family. | 0.731 |
SSO2397 | htpX-like | SSO2397 | SSO2694 | Conserved hypothetical protein. | Heat shock protein X, protease htpX homolog, putative (htpX-like); Regulation, Chaperones. | 0.731 |
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