STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSO2383Conserved hypothetical protein; High hit: PAB1716. (240 aa)    
Predicted Functional Partners:
SSO0625
GTP-binding protein; Uncategorized.
  
 
 0.982
rps8E
LSU ribosomal protein S8E (rps8E); Translation, Ribosomal Proteins.
  
 
 0.966
eiF6
Translation initiation factor 6 (eiF 6) (eiF6); Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex. Inhibits translation of both leadered and leaderless mRNAs, maybe by binding to the 50S ribosome subunit, preventing it from binding to the 30S subunit; Belongs to the eIF-6 family.
   
 
 0.963
rplp0
LSU acidic ribosomal protein P0 homolog (rplp0); Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.
  
 
 0.939
SSO2373
Conserved hypothetical protein; MJ0443.
 
  
 0.938
rpl30AB
LSU ribosomal protein L30AB (rpl30AB); Translation, Ribosomal Proteins.
  
 
 0.926
SSO2385
GTP binding conserved hypothetical protein; Belongs to GTP1/OBG family; Uncategorized.
  
    0.911
RsgA
GTP binding protein, hypothetical; Regulation; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
   
 
 0.906
rpl18AB
LSU ribosomal protein L18AB (rpl18AB); This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
  
 
 0.903
eif2B
Translation initiation factor 2, beta subunit (eif2B); eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-beta/eIF-5 family.
  
  
 0.891
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.