Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SSO2158 | SSO2391 | SSO2158 | SSO2391 | Hypothetical protein; Putative methyltransferase. | Conserved hypothetical protein. | 0.746 |
SSO2391 | SSO2158 | SSO2391 | SSO2158 | Conserved hypothetical protein. | Hypothetical protein; Putative methyltransferase. | 0.746 |
SSO2391 | SSO2395 | SSO2391 | SSO2395 | Conserved hypothetical protein. | Hypothetical protein. | 0.574 |
SSO2391 | SSO2458 | SSO2391 | SSO2458 | Conserved hypothetical protein. | Conserved hypothetical protein; Similarity with APE2473. | 0.402 |
SSO2391 | ahcY | SSO2391 | SSO0755 | Conserved hypothetical protein. | S-adenosyl-L-homocysteine hydrolase (ahcY); May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.471 |
SSO2391 | icaA | SSO2391 | SSO2389 | Conserved hypothetical protein. | Glucosaminyltransferase, intercellular adhesion protein A homolog, putative (icaA); Cell Envelope, Lipoproteins and porins. | 0.767 |
SSO2391 | moaE | SSO2391 | SSO2394 | Conserved hypothetical protein. | Cofactor Biosynthesis, Molybdopterin. | 0.920 |
SSO2391 | nagD-like | SSO2391 | SSO2355 | Conserved hypothetical protein. | Phosphatase, putative (nagD-like); Similarity with nag-operon (glucosamine-6P-conversion; E.coli) nagD gene; Central Intermediary Metabolism. | 0.560 |
SSO2391 | ppa | SSO2391 | SSO2390 | Conserved hypothetical protein. | Inorganic pyrophosphatase, putative (ppa); Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions. | 0.781 |
SSO2391 | thiD-2 | SSO2391 | SSO2393 | Conserved hypothetical protein. | Phosphomethylpyrimidine kinase (thiD-2); Cofactor Biosynthesis, Thiamine. | 0.822 |
SSO2395 | SSO2391 | SSO2395 | SSO2391 | Hypothetical protein. | Conserved hypothetical protein. | 0.574 |
SSO2395 | icaA | SSO2395 | SSO2389 | Hypothetical protein. | Glucosaminyltransferase, intercellular adhesion protein A homolog, putative (icaA); Cell Envelope, Lipoproteins and porins. | 0.533 |
SSO2395 | moaE | SSO2395 | SSO2394 | Hypothetical protein. | Cofactor Biosynthesis, Molybdopterin. | 0.829 |
SSO2395 | ppa | SSO2395 | SSO2390 | Hypothetical protein. | Inorganic pyrophosphatase, putative (ppa); Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions. | 0.544 |
SSO2395 | thiD-2 | SSO2395 | SSO2393 | Hypothetical protein. | Phosphomethylpyrimidine kinase (thiD-2); Cofactor Biosynthesis, Thiamine. | 0.608 |
SSO2458 | SSO2391 | SSO2458 | SSO2391 | Conserved hypothetical protein; Similarity with APE2473. | Conserved hypothetical protein. | 0.402 |
ahcY | SSO2391 | SSO0755 | SSO2391 | S-adenosyl-L-homocysteine hydrolase (ahcY); May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | Conserved hypothetical protein. | 0.471 |
ahcY | ppa | SSO0755 | SSO2390 | S-adenosyl-L-homocysteine hydrolase (ahcY); May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | Inorganic pyrophosphatase, putative (ppa); Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions. | 0.442 |
icaA | SSO2391 | SSO2389 | SSO2391 | Glucosaminyltransferase, intercellular adhesion protein A homolog, putative (icaA); Cell Envelope, Lipoproteins and porins. | Conserved hypothetical protein. | 0.767 |
icaA | SSO2395 | SSO2389 | SSO2395 | Glucosaminyltransferase, intercellular adhesion protein A homolog, putative (icaA); Cell Envelope, Lipoproteins and porins. | Hypothetical protein. | 0.533 |
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