STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
accCBiotin carboxylase a subunit of propionyl-CoA carboxylase (accC); Lipid metabolism. (510 aa)    
Predicted Functional Partners:
SSO2464
Biotin carboxyl carrier protein of propionyl-CoA carboxylase beta subunit; Lipid metabolism.
 
 
 0.999
bioR
Biotin--(acetyl-CoA carboxylase) synthetase (bioR); Cofactor Biosynthesis, Biotin.
 
 0.995
ppcB
Propionyl-CoA carboxylase beta subunit (ppcB); Lipid metabolism.
  
 
 0.991
gatA-2
Glutamyl-tRNA amidotransferase, subunit A (gatA-2); Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
 
  
 0.898
gatA-1
Glutamyl-tRNA amidotransferase, subunit A (gatA-1); Translation, .tRNAs.
 
  
 0.882
SSO1214
Carbonic anhydrase; Catalyzes the conversion of carbon disulfide into hydrogen sulfide and carbon dioxide, with carbonyl sulfide as an intermediate. Likely plays a key role in sulfur metabolism in S.solfataricus. Does not show carbonic anhydrase activity (hydration of CO(2) to carbonate).
  
 
 0.666
SSO2735
Hypothetical protein.
  
 
 0.666
pyrH
Uridylate kinase (pyrH); Catalyzes the reversible phosphorylation of UMP to UDP, with ATP as the most efficient phosphate donor. Is also able to phosphorylate dUMP, although much less efficiently.
   
    0.636
SSO3012
ABC transporter, ATP binding protein; Transport.
 
 0.627
asd-2
Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (asd-2); Amino Acid Biosynthesis, Aspartate.
    
 0.596
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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