STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSO2627CoA-ligase / coenzyme F390 synthetase, putative; C-terminal fragment. Frameshift with SSO10784; Cofactor Biosynthesis. (339 aa)    
Predicted Functional Partners:
SSO10784
CoA-ligase / coenzyme F390 synthetase, putative; N-terminal fragment. Frameshift with SSO2627; Cofactor Biosynthesis.
     0.988
acaB-7
Acetyl-CoA c-acetyltransferase (acetoacetyl-CoA thiolase) (acaB-7); Lipid metabolism.
  
  
 0.741
SSO2626
Conserved hypothetical protein.
       0.702
paaI
Phenylacetic acid degradation paaI protein homolog (paaI); Cellular Processes.
 
  
 0.647
SSO2628
Hypothetical protein.
       0.598
paaF-6
Enoyl CoA hydratase (paaF-6); Lipid metabolism.
  
  
 0.562
paaF-7
Enoyl CoA hydratase (paaF-7); Lipid metabolism; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.562
SSO1218
Energy Metabolism, Dehydrogenases.
  
 
 0.536
gapN-1
Glyceraldehyde-3-phosphate dehydrogenase, NADP dependent (gapN-1); Energy Metabolism.
  
 
 0.536
gapN-2
Glyceraldehyde-3-phosphate dehydrogenase, NADP dependent (gapN-2); Energy Metabolism.
  
 
 0.536
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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