STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gabT-14-aminobutyrate aminotransferase (gabT-1); Amino Acid Biosynthesis; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (440 aa)    
Predicted Functional Partners:
SSO3006
Alpha-mannosidase; Central Intermediary Metabolism, Cytoplasmic polysaccharides.
   
  
 0.877
lacS
Beta-glycosidase (lacS); Central Intermediary Metabolism, Cytoplasmic polysaccharides.
     
 0.611
SSO2729
Phosphoesterase related protein. Multicopy. Similar to SSO2085, SSO2237,SSO2725. Similarity with MJ1162, PH0305, MTH1882, PAB1249.
       0.562
SSO2728
Amino acid transporter, putative; Transport.
       0.561
argF
Ornithine carbamoyltransferase (argF); Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
  
 0.523
SSO0906
Soluble hydrogenase, small subunit; Uncategorized.
  
 
 0.473
agxT
Serine-pyruvate aminotransferase (agxT); Amino Acid Biosynthesis, Serine.
  
 
 0.473
SSO1533
Homogentisate oxygenase related protein; Uncategorized.
   
  
 0.451
aspB-3
Aspartate aminotransferase (aspB-3); Amino Acid Biosynthesis, Aspartate.
 
 
 0.422
SSO1218
Energy Metabolism, Dehydrogenases.
 
 
 0.420
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.