Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SSO2933 | SSO2937 | SSO2933 | SSO2937 | Partial transposase ISC1078. | Hypothetical protein. | 0.526 |
SSO2933 | hyuA-3 | SSO2933 | SSO2936 | Partial transposase ISC1078. | N-methylhydantoinase A (hyuA-3); Amino Acid Biosynthesis. | 0.526 |
SSO2933 | hyuB-3 | SSO2933 | SSO2934 | Partial transposase ISC1078. | N-methylhydantoinase B (hyuB-3); Amino Acid Biosynthesis. | 0.526 |
SSO2937 | SSO2933 | SSO2937 | SSO2933 | Hypothetical protein. | Partial transposase ISC1078. | 0.526 |
SSO2937 | hyuA-3 | SSO2937 | SSO2936 | Hypothetical protein. | N-methylhydantoinase A (hyuA-3); Amino Acid Biosynthesis. | 0.773 |
SSO2937 | hyuB-3 | SSO2937 | SSO2934 | Hypothetical protein. | N-methylhydantoinase B (hyuB-3); Amino Acid Biosynthesis. | 0.773 |
codA | huyA-1 | SSO2770 | SSO1663 | Cytosine deaminase (codA); Pyrimidines. | N-methylhydantoinase A (huyA-1); Also known as agaF; Amino Acid Biosynthesis. | 0.900 |
codA | huyB-1 | SSO2770 | SSO1662 | Cytosine deaminase (codA); Pyrimidines. | N-methylhydantoinase B (huyB-1); Also known as agaG; Amino Acid Biosynthesis. | 0.901 |
codA | hyuA-3 | SSO2770 | SSO2936 | Cytosine deaminase (codA); Pyrimidines. | N-methylhydantoinase A (hyuA-3); Amino Acid Biosynthesis. | 0.900 |
codA | hyuB-3 | SSO2770 | SSO2934 | Cytosine deaminase (codA); Pyrimidines. | N-methylhydantoinase B (hyuB-3); Amino Acid Biosynthesis. | 0.901 |
huyA-1 | codA | SSO1663 | SSO2770 | N-methylhydantoinase A (huyA-1); Also known as agaF; Amino Acid Biosynthesis. | Cytosine deaminase (codA); Pyrimidines. | 0.900 |
huyA-1 | huyB-1 | SSO1663 | SSO1662 | N-methylhydantoinase A (huyA-1); Also known as agaF; Amino Acid Biosynthesis. | N-methylhydantoinase B (huyB-1); Also known as agaG; Amino Acid Biosynthesis. | 0.999 |
huyA-1 | hyuA-3 | SSO1663 | SSO2936 | N-methylhydantoinase A (huyA-1); Also known as agaF; Amino Acid Biosynthesis. | N-methylhydantoinase A (hyuA-3); Amino Acid Biosynthesis. | 0.908 |
huyA-1 | hyuB-2 | SSO1663 | SSO2010 | N-methylhydantoinase A (huyA-1); Also known as agaF; Amino Acid Biosynthesis. | N-methyl hydantoinase B (hyuB-2); Amino Acid Biosynthesis. | 0.991 |
huyA-1 | hyuB-3 | SSO1663 | SSO2934 | N-methylhydantoinase A (huyA-1); Also known as agaF; Amino Acid Biosynthesis. | N-methylhydantoinase B (hyuB-3); Amino Acid Biosynthesis. | 0.999 |
huyB-1 | codA | SSO1662 | SSO2770 | N-methylhydantoinase B (huyB-1); Also known as agaG; Amino Acid Biosynthesis. | Cytosine deaminase (codA); Pyrimidines. | 0.901 |
huyB-1 | huyA-1 | SSO1662 | SSO1663 | N-methylhydantoinase B (huyB-1); Also known as agaG; Amino Acid Biosynthesis. | N-methylhydantoinase A (huyA-1); Also known as agaF; Amino Acid Biosynthesis. | 0.999 |
huyB-1 | hyuA-3 | SSO1662 | SSO2936 | N-methylhydantoinase B (huyB-1); Also known as agaG; Amino Acid Biosynthesis. | N-methylhydantoinase A (hyuA-3); Amino Acid Biosynthesis. | 0.999 |
huyB-1 | hyuB-3 | SSO1662 | SSO2934 | N-methylhydantoinase B (huyB-1); Also known as agaG; Amino Acid Biosynthesis. | N-methylhydantoinase B (hyuB-3); Amino Acid Biosynthesis. | 0.911 |
hyuA-3 | SSO2933 | SSO2936 | SSO2933 | N-methylhydantoinase A (hyuA-3); Amino Acid Biosynthesis. | Partial transposase ISC1078. | 0.526 |
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