STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hpcE-32-hydroxyhepta-2, 4-diene-1,7-dioate isomerase (hpcE-3); Central Intermediary Metabolism. (288 aa)    
Predicted Functional Partners:
kdaD
Conserved hypothetical protein; Participates in a pentose oxidation pathway that converts D- arabinonate to 2-oxoglutarate.
 
   
 0.853
SSO1533
Homogentisate oxygenase related protein; Uncategorized.
  
  
 0.789
cutA-6
Carbon monoxide dehydrogenase, large chain (cutA-6); Energy Metabolism.
       0.543
SSO1218
Energy Metabolism, Dehydrogenases.
  
 
 0.529
gapN-1
Glyceraldehyde-3-phosphate dehydrogenase, NADP dependent (gapN-1); Energy Metabolism.
  
 
 0.529
gapN-2
Glyceraldehyde-3-phosphate dehydrogenase, NADP dependent (gapN-2); Energy Metabolism.
  
 
 0.529
aldhT
Aldehyde dehydrogenase (aldhT); 2,5-dioxopentanoate dehydrogenase involved in the degradation of pentoses such as D-arabinose or D-xylose, a major component of hemicelluloses such as xylan. Catalyzes the fifth reaction in the pentose utilization pathway through dehydratation of 2,5- dioxopentanoate into 2-oxoglutarate. Shows also dehydrogenase activity toward glycolaldehyde and DL-glyceraldehyde.
  
 
 0.529
gapN-3
Glyceraldehyde-3-phosphate dehydrogenase, NADP dependent (gapN-3); Catalyzes the irreversible NAD(P)-dependent non- phosphorylating oxidation of glyceraldehyde-3-phosphate (GAP) to 3- phosphoglycerate (3PG). It is highly specific for D-GAP.
  
 
 0.529
gltA
Citrate synthase; Energy Metabolism; Belongs to the citrate synthase family.
  
  
 0.479
SSO2054
Catechol 2,3-dioxygenase (metapyrocatechase); Amino Acid Biosynthesis, Aromatic amino acids.
  
  
 0.471
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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