STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSO2981Epimerase, putative; Energy Metabolism, Sugar metabolism. (303 aa)    
Predicted Functional Partners:
rps3AE
SSU ribosomal protein S3AE (rps3AE); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eS1 family.
  
 0.922
rps14AB
SSU ribosomal protein S14AB (rps14AB); Binds 16S rRNA, required for the assembly of 30S particles.
  
 0.919
rps19AB
SSU ribosomal protein S19AB (rps19AB); Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
  
 0.915
rpS12AB
SSU ribosomal protein S12AB (rpS12AB); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.
 
 0.913
rpl7AE
LSU ribosomal protein L7AE (rpl7AE); Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.910
rps11AB
SSU ribosomal protein S11AB (rps11AB); Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family.
 
 0.905
rps17AB
SSU ribosomal protein S17AB (rps17AB); One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
  
 0.894
rps3AB
SSU ribosomal protein S3AB (rps3AB); Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
  
 0.894
rpS13E
SSU ribosomal protein S13E (rpS13E); Close hits to several plant species' 40S ribosomal protein; Translation, Ribosomal Proteins.
  
 0.892
rps5AB
SSU ribosomal protein S5AB (rps5AB); With S4 and S12 plays an important role in translational accuracy.
  
 0.892
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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