STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aldhTAldehyde dehydrogenase (aldhT); 2,5-dioxopentanoate dehydrogenase involved in the degradation of pentoses such as D-arabinose or D-xylose, a major component of hemicelluloses such as xylan. Catalyzes the fifth reaction in the pentose utilization pathway through dehydratation of 2,5- dioxopentanoate into 2-oxoglutarate. Shows also dehydrogenase activity toward glycolaldehyde and DL-glyceraldehyde. (478 aa)    
Predicted Functional Partners:
kdaD
Conserved hypothetical protein; Participates in a pentose oxidation pathway that converts D- arabinonate to 2-oxoglutarate.
  
 
 0.984
ilvD
Dihydroxy-acid dehydratase (ilvD); Amino Acid Biosynthesis; Belongs to the IlvD/Edd family.
  
 
 0.696
araD
Mandelate racemase /muconate lactonizing enzyme related protein (MR/MLE); Catalyzes the dehydration of D-arabinonate to 2-keto-3-deoxy- D-arabinonate. Participates in a pentose oxidation pathway that converts D-arabinonate to 2-oxoglutarate.
      
 0.685
pip
Tricorn protease interacting factor F1; Cleaves H-Pro-AMC as well as a wide spectrum of amino acid substrates and several peptide substrates without a proline at the N- terminus. In conjunction with the three factors F1, F2 and F3, Tricorn degrades oligopeptides in a sequential manner, yielding free amino acids (By similarity).
  
 
 0.649
adh-4
Alcohol dehydrogenase (Zn containing) (adh-4); Energy Metabolism.
  
  
 0.627
gltA
Citrate synthase; Energy Metabolism; Belongs to the citrate synthase family.
  
 
 0.623
SSO1136
Hypothetical protein.
  
  
 0.592
SSO1303
Mandelate racemase /muconate lactonizing enzyme related protein (MR/MLE); Cellular Processes.
      
 0.577
SSO2113
Metabolite permease, putative; Similar to SSO2476; Transport, Cell membrane transport; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.569
SSO2476
Metabolite permease, putative; Similar to SSO2113; Transport, Cell membrane transport; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.569
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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