STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSO3172Second ORF in transposon ISC1904. (422 aa)    
Predicted Functional Partners:
SSO3171
First ORF in transposon ISC1904.
  
    0.786
TsaA
VirR related conserved hypothetical protein; Uncategorized.
       0.661
SSO2123
First ORF in transposon ISC1316.
  
     0.614
SSO3256
Second ORF in transposon ISC1316; ISC1316 is split by another IS element (SSO1317).
  
     0.610
SSO1682
Partial transposase in ISC1316.
  
     0.582
SSO3174
Conserved hypothetical protein.
       0.496
SSO3168
Conserved hypothetical protein.
       0.493
SSO3169
ABC transporter, ATP binding protein related protein; Transport.
       0.493
SSO1475
Transposase ISC1476.
  
     0.415
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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