Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ST0071 | ST2392 | STK_00710 | STK_23920 | Carboxylesterase. | Putative arsenite oxidase small subunit. | 0.704 |
ST0071 | mtaP | STK_00710 | STK_04850 | Carboxylesterase. | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | 0.777 |
ST0071 | nuoA | STK_00710 | STK_22160 | Carboxylesterase. | Putative NADH-quinone oxidoreductase subunit A. | 0.701 |
ST0071 | nuoB | STK_00710 | STK_15270 | Carboxylesterase. | Putative NADH-quinone oxidoreductase subunit B; Belongs to the complex I 20 kDa subunit family. | 0.700 |
ST0071 | nuoC | STK_00710 | STK_22170 | Carboxylesterase. | Putative NADH-quinone oxidoreductase subunit C. | 0.698 |
ST0071 | nuoH | STK_00710 | STK_22190 | Carboxylesterase. | Putative NADH-quinone oxidoreductase subunit H; N-term changed (-3). | 0.703 |
ST0071 | nuoI | STK_00710 | STK_22200 | Carboxylesterase. | Putative NADH-quinone oxidoreductase subunit I; N-term changed (-6). | 0.917 |
ST0071 | soxF | STK_00710 | STK_01080 | Carboxylesterase. | Rieske iron-sulfur protein II; Protein synonym:second terminal oxidase complex subunit. | 0.704 |
ST0071 | soxL | STK_00710 | STK_16660 | Carboxylesterase. | Protein synonym:cytochrome bc1-analogous complex subunit. | 0.704 |
ST0071 | soxL2 | STK_00710 | STK_01340 | Carboxylesterase. | Rieske iron-sulfur protein; Protein synonym:terminal oxidase complex subunit. | 0.704 |
ST2392 | ST0071 | STK_23920 | STK_00710 | Putative arsenite oxidase small subunit. | Carboxylesterase. | 0.704 |
ST2392 | nuoA | STK_23920 | STK_22160 | Putative arsenite oxidase small subunit. | Putative NADH-quinone oxidoreductase subunit A. | 0.794 |
ST2392 | nuoB | STK_23920 | STK_15270 | Putative arsenite oxidase small subunit. | Putative NADH-quinone oxidoreductase subunit B; Belongs to the complex I 20 kDa subunit family. | 0.881 |
ST2392 | nuoC | STK_23920 | STK_22170 | Putative arsenite oxidase small subunit. | Putative NADH-quinone oxidoreductase subunit C. | 0.937 |
ST2392 | nuoH | STK_23920 | STK_22190 | Putative arsenite oxidase small subunit. | Putative NADH-quinone oxidoreductase subunit H; N-term changed (-3). | 0.791 |
ST2392 | nuoI | STK_23920 | STK_22200 | Putative arsenite oxidase small subunit. | Putative NADH-quinone oxidoreductase subunit I; N-term changed (-6). | 0.947 |
mtaP | ST0071 | STK_04850 | STK_00710 | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | Carboxylesterase. | 0.777 |
nuoA | ST0071 | STK_22160 | STK_00710 | Putative NADH-quinone oxidoreductase subunit A. | Carboxylesterase. | 0.701 |
nuoA | ST2392 | STK_22160 | STK_23920 | Putative NADH-quinone oxidoreductase subunit A. | Putative arsenite oxidase small subunit. | 0.794 |
nuoA | nuoB | STK_22160 | STK_15270 | Putative NADH-quinone oxidoreductase subunit A. | Putative NADH-quinone oxidoreductase subunit B; Belongs to the complex I 20 kDa subunit family. | 0.999 |
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