Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ST0470 | STK_04715 | STK_04700 | STK_04715 | Hypothetical protein. | Hypothetical protein. | 0.781 |
ST0470 | moaC | STK_04700 | STK_04720 | Hypothetical protein. | Molybdenum cofactor biosynthesis protein MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.752 |
ST0470 | orc1-2 | STK_04700 | STK_04710 | Hypothetical protein. | Orc1/Cdc6 initiator protein 2; Involved in regulation of DNA replication. | 0.706 |
ST2267 | moaA | STK_22670 | STK_13830 | Adenylyltransferase. | Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family. | 0.825 |
ST2267 | moaB | STK_22670 | STK_23150 | Adenylyltransferase. | Molybdopterin biosynthesis protein MoaB. | 0.788 |
ST2267 | moaC | STK_22670 | STK_04720 | Adenylyltransferase. | Molybdenum cofactor biosynthesis protein MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.816 |
ST2267 | moaD/moaE | STK_22670 | STK_05270 | Adenylyltransferase. | Molybdopterin converting factor; Protein synonym:molybdopterin synthase MoaE/MoaD. | 0.999 |
ST2267 | mobB | STK_22670 | STK_20440 | Adenylyltransferase. | Putative molybdopterin-guanine dinucleotide biosynthesis protein MobB. | 0.620 |
ST2267 | moeA | STK_22670 | STK_05040 | Adenylyltransferase. | Molybdopterin biosynthesis protein MoeA. | 0.745 |
ST2267 | moeA-2 | STK_22670 | STK_20450 | Adenylyltransferase. | Molybdopterin biosynthesis protein MoeA. | 0.728 |
STK_04715 | ST0470 | STK_04715 | STK_04700 | Hypothetical protein. | Hypothetical protein. | 0.781 |
STK_04715 | moaC | STK_04715 | STK_04720 | Hypothetical protein. | Molybdenum cofactor biosynthesis protein MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.864 |
STK_04715 | orc1-2 | STK_04715 | STK_04710 | Hypothetical protein. | Orc1/Cdc6 initiator protein 2; Involved in regulation of DNA replication. | 0.854 |
moaA | ST2267 | STK_13830 | STK_22670 | Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family. | Adenylyltransferase. | 0.825 |
moaA | moaB | STK_13830 | STK_23150 | Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family. | Molybdopterin biosynthesis protein MoaB. | 0.932 |
moaA | moaC | STK_13830 | STK_04720 | Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family. | Molybdenum cofactor biosynthesis protein MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.999 |
moaA | moaD/moaE | STK_13830 | STK_05270 | Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family. | Molybdopterin converting factor; Protein synonym:molybdopterin synthase MoaE/MoaD. | 0.999 |
moaA | mobB | STK_13830 | STK_20440 | Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family. | Putative molybdopterin-guanine dinucleotide biosynthesis protein MobB. | 0.771 |
moaA | moeA | STK_13830 | STK_05040 | Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family. | Molybdopterin biosynthesis protein MoeA. | 0.862 |
moaA | moeA-2 | STK_13830 | STK_20450 | Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family. | Molybdopterin biosynthesis protein MoeA. | 0.908 |
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