Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ST0081 | ST1565 | STK_00810 | STK_15650 | Putative formate dehydrogenase. | Serine/threonine-protein kinase. | 0.687 |
ST0829 | ST1565 | STK_08290 | STK_15650 | Transcriptional regulator; Protein synonym:FHA domain-containing protein. | Serine/threonine-protein kinase. | 0.884 |
ST0829 | ST2367 | STK_08290 | STK_23670 | Transcriptional regulator; Protein synonym:FHA domain-containing protein. | Protein-serine/threonine phosphatase; N-term changed (-24). | 0.606 |
ST0829 | ST2519 | STK_08290 | STK_25190 | Transcriptional regulator; Protein synonym:FHA domain-containing protein. | Hypothetical protein; N-term changed (+264). | 0.687 |
ST0829 | flaB | STK_08290 | STK_25180 | Transcriptional regulator; Protein synonym:FHA domain-containing protein. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. | 0.687 |
ST0829 | flaF | STK_08290 | STK_25210 | Transcriptional regulator; Protein synonym:FHA domain-containing protein. | Putative flagella accessory protein FlaF. | 0.686 |
ST0945 | ST1565 | STK_09450 | STK_15650 | Putative GTPase. | Serine/threonine-protein kinase. | 0.876 |
ST0945 | ST2367 | STK_09450 | STK_23670 | Putative GTPase. | Protein-serine/threonine phosphatase; N-term changed (-24). | 0.953 |
ST1565 | ST0081 | STK_15650 | STK_00810 | Serine/threonine-protein kinase. | Putative formate dehydrogenase. | 0.687 |
ST1565 | ST0829 | STK_15650 | STK_08290 | Serine/threonine-protein kinase. | Transcriptional regulator; Protein synonym:FHA domain-containing protein. | 0.884 |
ST1565 | ST0945 | STK_15650 | STK_09450 | Serine/threonine-protein kinase. | Putative GTPase. | 0.876 |
ST1565 | ST1566 | STK_15650 | STK_15660 | Serine/threonine-protein kinase. | Hypothetical protein. | 0.741 |
ST1565 | ST2367 | STK_15650 | STK_23670 | Serine/threonine-protein kinase. | Protein-serine/threonine phosphatase; N-term changed (-24). | 0.717 |
ST1565 | ST2519 | STK_15650 | STK_25190 | Serine/threonine-protein kinase. | Hypothetical protein; N-term changed (+264). | 0.687 |
ST1565 | flaB | STK_15650 | STK_25180 | Serine/threonine-protein kinase. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. | 0.687 |
ST1565 | flaF | STK_15650 | STK_25210 | Serine/threonine-protein kinase. | Putative flagella accessory protein FlaF. | 0.683 |
ST1565 | nuoN | STK_15650 | STK_22230 | Serine/threonine-protein kinase. | Putative NADH-quinone oxidoreductase subunit N. | 0.734 |
ST1565 | trpB-2 | STK_15650 | STK_15670 | Serine/threonine-protein kinase. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.741 |
ST1566 | ST1565 | STK_15660 | STK_15650 | Hypothetical protein. | Serine/threonine-protein kinase. | 0.741 |
ST1566 | trpB-2 | STK_15660 | STK_15670 | Hypothetical protein. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.773 |
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