STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ST1652Hypothetical protein. (488 aa)    
Predicted Functional Partners:
ST1550
Methyltransferase.
    
 
 0.841
ST1651
Hypothetical protein.
       0.694
tatC
Putative Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
 
  
 0.595
dfp
Coenzyme A biosynthesis bifunctional protein CoaBC; Protein synonym:DNA/pantothenate metabolism flavoprotein; protein synonym:phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase.
 
  
 0.586
ST1650
Carboxypeptidase; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.
       0.507
phr
DNA photolyase; Protein synonym:deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family.
 
   
 0.487
ST2267
Adenylyltransferase.
 
    0.486
hemB
Porphobilinogen synthase; Protein synonym:delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
     
 0.478
ubiX
Putative phenolic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
     
 0.476
ST0669
Glycerophosphoryl diester phosphodiesterase.
 
     0.466
Your Current Organism:
Sulfurisphaera tokodaii
NCBI taxonomy Id: 273063
Other names: S. tokodaii str. 7, Sulfolobus sp. (strain 7), Sulfolobus sp. 7, Sulfolobus tokodaii str. 7, Sulfurisphaera tokodaii str. 7, Sulfurisphaera tokodaii strain 7
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