STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfbDdTDP-4-dehydrorhamnose reductase. (273 aa)    
Predicted Functional Partners:
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
 0.999
rfbB
dTDP-glucose 4,6-dehydratase.
 
 
 0.999
rfbA
Glucose-1-phosphate thymidylyltransferase; Protein synonym:dTDP-glucose synthase.
 
  
 0.995
ST2425
Hypothetical protein.
  
  
 
0.918
galE
Putative UDP-glucose 4-epimerase.
  
 
 0.734
tmk
Probable thymidylate kinase; Protein synonym:dTMP kinase.
     
 0.690
ST1542
Hypothetical protein; N-term changed (+111).
     
 0.690
tmk-2
Probable thymidylate kinase; Protein synonym:dTMP kinase.
     
 0.690
ST2352
Putative sugar-phosphate nucleotidyltransferase.
 
  
 0.653
dut
dUTP diphosphatase; Catalyzes the deamination of dCTP to dUTP.
   
    0.629
Your Current Organism:
Sulfurisphaera tokodaii
NCBI taxonomy Id: 273063
Other names: S. tokodaii str. 7, Sulfolobus sp. (strain 7), Sulfolobus sp. 7, Sulfolobus tokodaii str. 7, Sulfurisphaera tokodaii str. 7, Sulfurisphaera tokodaii strain 7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.