Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ST1638 | adh | STK_16380 | STK_00530 | Putative alcohol dehydrogenase. | Protein synonym:medium-chain alcohol dehydrogenase. | 0.778 |
ST1638 | adh-3 | STK_16380 | STK_25770 | Putative alcohol dehydrogenase. | NAD-dependent alcohol dehydrogenase; N-terminus of this ORF was identified by Edman sequencing; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.778 |
ST1638 | pgk | STK_16380 | STK_13570 | Putative alcohol dehydrogenase. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.602 |
ST1638 | ssr | STK_16380 | STK_20560 | Putative alcohol dehydrogenase. | Succinate-semialdehyde reductase. | 0.958 |
ST2252 | ST2341 | STK_22520 | STK_23410 | Putative NAD-dependent alcohol dehydrogenase. | Putative sorbitol dehydrogenase. | 0.477 |
ST2252 | adh-3 | STK_22520 | STK_25770 | Putative NAD-dependent alcohol dehydrogenase. | NAD-dependent alcohol dehydrogenase; N-terminus of this ORF was identified by Edman sequencing; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.407 |
ST2252 | gdh | STK_22520 | STK_17040 | Putative NAD-dependent alcohol dehydrogenase. | Glucose dehydrogenase; Catalyzes the NAD(P)(+)-dependent oxidation of D-glucose to D-gluconate via gluconolactone. Can utilize both NAD(+) and NADP(+) as electron acceptor. Is involved in the degradation of glucose through a non-phosphorylative variant of the Entner-Doudoroff pathway. | 0.761 |
ST2252 | nox | STK_22520 | STK_00900 | Putative NAD-dependent alcohol dehydrogenase. | NADH oxidase. | 0.438 |
ST2252 | ssr | STK_22520 | STK_20560 | Putative NAD-dependent alcohol dehydrogenase. | Succinate-semialdehyde reductase. | 0.416 |
ST2341 | ST2252 | STK_23410 | STK_22520 | Putative sorbitol dehydrogenase. | Putative NAD-dependent alcohol dehydrogenase. | 0.477 |
ST2341 | adh | STK_23410 | STK_00530 | Putative sorbitol dehydrogenase. | Protein synonym:medium-chain alcohol dehydrogenase. | 0.509 |
ST2341 | adh-3 | STK_23410 | STK_25770 | Putative sorbitol dehydrogenase. | NAD-dependent alcohol dehydrogenase; N-terminus of this ORF was identified by Edman sequencing; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.493 |
ST2341 | pgk | STK_23410 | STK_13570 | Putative sorbitol dehydrogenase. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.405 |
ST2341 | ssr | STK_23410 | STK_20560 | Putative sorbitol dehydrogenase. | Succinate-semialdehyde reductase. | 0.424 |
ST2576 | adh-3 | STK_25760 | STK_25770 | Putative MFS transporter. | NAD-dependent alcohol dehydrogenase; N-terminus of this ORF was identified by Edman sequencing; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.479 |
adh | ST1638 | STK_00530 | STK_16380 | Protein synonym:medium-chain alcohol dehydrogenase. | Putative alcohol dehydrogenase. | 0.778 |
adh | ST2341 | STK_00530 | STK_23410 | Protein synonym:medium-chain alcohol dehydrogenase. | Putative sorbitol dehydrogenase. | 0.509 |
adh | adh-3 | STK_00530 | STK_25770 | Protein synonym:medium-chain alcohol dehydrogenase. | NAD-dependent alcohol dehydrogenase; N-terminus of this ORF was identified by Edman sequencing; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.902 |
adh | gdh | STK_00530 | STK_17040 | Protein synonym:medium-chain alcohol dehydrogenase. | Glucose dehydrogenase; Catalyzes the NAD(P)(+)-dependent oxidation of D-glucose to D-gluconate via gluconolactone. Can utilize both NAD(+) and NADP(+) as electron acceptor. Is involved in the degradation of glucose through a non-phosphorylative variant of the Entner-Doudoroff pathway. | 0.533 |
adh | nox | STK_00530 | STK_00900 | Protein synonym:medium-chain alcohol dehydrogenase. | NADH oxidase. | 0.402 |
page 1 of 3