Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ST0812 | ST0813 | STK_08120 | STK_08130 | Hypothetical protein. | Hypothetical protein; N-term changed (-3). | 0.678 |
ST0812 | ST0814 | STK_08120 | STK_08140 | Hypothetical protein. | Putative glycosidase. | 0.546 |
ST0812 | ST0815 | STK_08120 | STK_08150 | Hypothetical protein. | Glucan 1,4-alpha-glucosidase; Protein synonym:glucoamylase. | 0.519 |
ST0812 | ST0816 | STK_08120 | STK_08160 | Hypothetical protein. | Putative sugar-phosphate nucleotidyltransferase. | 0.519 |
ST0812 | STK_08110 | STK_08120 | STK_08110 | Hypothetical protein. | YjgF-like protein; Belongs to the RutC family. | 0.732 |
ST0813 | ST0812 | STK_08130 | STK_08120 | Hypothetical protein; N-term changed (-3). | Hypothetical protein. | 0.678 |
ST0813 | ST0814 | STK_08130 | STK_08140 | Hypothetical protein; N-term changed (-3). | Putative glycosidase. | 0.770 |
ST0813 | ST0815 | STK_08130 | STK_08150 | Hypothetical protein; N-term changed (-3). | Glucan 1,4-alpha-glucosidase; Protein synonym:glucoamylase. | 0.662 |
ST0813 | ST0816 | STK_08130 | STK_08160 | Hypothetical protein; N-term changed (-3). | Putative sugar-phosphate nucleotidyltransferase. | 0.686 |
ST0813 | ST0817 | STK_08130 | STK_08170 | Hypothetical protein; N-term changed (-3). | Putative glycosidase. | 0.610 |
ST0813 | ST0819 | STK_08130 | STK_08190 | Hypothetical protein; N-term changed (-3). | Hypothetical protein. | 0.833 |
ST0813 | STK_08110 | STK_08130 | STK_08110 | Hypothetical protein; N-term changed (-3). | YjgF-like protein; Belongs to the RutC family. | 0.913 |
ST0813 | glgA | STK_08130 | STK_08180 | Hypothetical protein; N-term changed (-3). | Glycogen synthase; N-term changed (-9). | 0.570 |
ST0814 | ST0812 | STK_08140 | STK_08120 | Putative glycosidase. | Hypothetical protein. | 0.546 |
ST0814 | ST0813 | STK_08140 | STK_08130 | Putative glycosidase. | Hypothetical protein; N-term changed (-3). | 0.770 |
ST0814 | ST0815 | STK_08140 | STK_08150 | Putative glycosidase. | Glucan 1,4-alpha-glucosidase; Protein synonym:glucoamylase. | 0.893 |
ST0814 | ST0816 | STK_08140 | STK_08160 | Putative glycosidase. | Putative sugar-phosphate nucleotidyltransferase. | 0.835 |
ST0814 | ST0817 | STK_08140 | STK_08170 | Putative glycosidase. | Putative glycosidase. | 0.910 |
ST0814 | ST0819 | STK_08140 | STK_08190 | Putative glycosidase. | Hypothetical protein. | 0.515 |
ST0814 | STK_08110 | STK_08140 | STK_08110 | Putative glycosidase. | YjgF-like protein; Belongs to the RutC family. | 0.624 |
page 1 of 4