STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AmpCBeta-lactamase class C and other penicillin binding proteins; Best Blastp hit = gi|11228458|emb|CAC16441.1| (AL450165) putative esterase [Streptomyces coelicolor], score 180, E-value 3.00E-44. (355 aa)    
Predicted Functional Partners:
TTE0214
Conserved hypothetical protein; Best Blastp hit = gi|732404|sp|P40407|YBBC_BACSU HYPOTHETICAL 46.0 KDA PROTEIN IN FEUA-SIGW INTERGENIC REGION PRECURSOR (ORF2) gi|2126965|pir||I39840 hypothetical protein ybbC - Bacillus subtilis gi|438456|gb|AAA64352.1| '(L19954) 19/20 residue stretch (32-51) identical to N-terminal putative signal sequence of unknown, partly cloned B. subtilis gene; putative [Bacillus subtilis]' gi|1944005|dbj|BAA19498.1| (AB002150) YbbC [Bacillus subtilis] gi|2632432|emb|CAB11941.1| (Z99104) alternate gene name: yzbB [Bacillus subtilis], score 367, E-value 1.00E-100.
  
 0.997
BglX
Beta-glucosidase-related glycosidases; Best Blastp hit = gi|10173289|dbj|BAB04394.1| (AP001509) beta-hexosamidase A precursor [Bacillus halodurans], score 380, E-value 1.00E-104.
  
 0.992
BglX2
Beta-glucosidase-related glycosidases; Best Blastp hit = gi|10173289|dbj|BAB04394.1| (AP001509) beta-hexosamidase A precursor [Bacillus halodurans], score 481, E-value 1.00E-134.
  
 0.965
murQ
Predicted sugar phosphate isomerase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
  
 0.944
TTE0216
Predicted N-acetylglucosamine kinase; Best Blastp hit = gi|6634777|gb|AAF19757.1|AC009917_16 (AC009917) F26G16.16 [Arabidopsis thaliana], score 142, E-value 6.00E-33.
 
    0.870
RimI
Acetyltransferases.
 
    0.837
anmK
Conserved hypothetical protein; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
 
   
 0.817
RpiR
Transcriptional regulator; Best Blastp hit = gi|7388462|sp|Q45581|YBBH_BACSU HYPOTHETICAL 33.3 KDA PROTEIN IN FEUA-SIGW INTERGENIC REGION gi|1944008|dbj|BAA19503.1| (AB002150) YbbH [Bacillus subtilis], score 194, E-value 1.00E-48.
  
    0.792
RimI2
Acetyltransferases.
    0.791
TTE0219
Conserved hypothetical protein; Best Blastp hit = gi|1176704|sp|P42981|YPJG_BACSU HYPOTHETICAL 24.8 KD PROTEIN IN DapB-PAPS INTERGENIC REGION gi|7474677|pir||F69937 conserved hypothetical protein ypjG - Bacillus subtilis gi|755605|gb|AAA92876.1| (L38424) unknown [Bacillus subtilis] gi|1146236|gb|AAB38444.1| (L47709) putative [Bacillus subtilis] gi|2634665|emb|CAB14163.1| (Z99115) alternate gene name: jojG; similar to hypothetical proteins [Bacillus subtilis], score 72.8, E-value 4.00E-12.
 
     0.704
Your Current Organism:
Caldanaerobacter subterraneus
NCBI taxonomy Id: 273068
Other names: C. subterraneus subsp. tengcongensis MB4, Caldanaerobacter subterraneus subsp. tengcongensis MB4, Thermoanaerobacter tengcongensis MB4, Thermoanaerobacter tengcongensis str. MB4, Thermoanaerobacter tengcongensis strain MB4
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