STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tar3Methyl-accepting chemotaxis protein; Best Blastp hit = gi|10173621|dbj|BAB04725.1| (AP001510) methyl-accepting chemotaxis protein [Bacillus halodurans], score 111, E-value 9.00E-24. (284 aa)    
Predicted Functional Partners:
CheB
Protein-glutamate methylesterase/protein-glutamine glutaminase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.983
CheA
Chemotaxis protein histidine kinase and related kinases; Best Blastp hit = gi|11354461|pir||E82205 chemotaxis protein CheA VC1397 [imported] - Vibrio cholerae (group O1 strain N16961) gi|9655892|gb|AAF94554.1| (AE004218) chemotaxis protein CheA [Vibrio cholerae], score 326, E-value 8.00E-88.
 
 0.983
CheA2
Chemotaxis protein histidine kinase and related kinases; Best Blastp hit = gi|10175592|dbj|BAB06689.1| (AP001517) two-component sensor histidine kinase involved in chemotaxis [Bacillus halodurans], score 542, E-value 1.00E-153.
 
 0.983
CheB2
Best Blastp hit = gi|11262668|pir||H82122 protein-glutamate methylesterase CheB VC2062 [imported] - Vibrio cholerae (group O1 strain N16961) gi|9656608|gb|AAF95208.1| (AE004280) protein-glutamate methylesterase CheB [Vibrio cholerae], score 155, E-value 3.00E-37.
 
 0.983
CheR
Methylase of chemotaxis methyl-accepting proteins; Best Blastp hit = gi|11256950|pir||G82205 chemotaxis protein methyltransferase CheR VC1399 [imported] - Vibrio cholerae (group O1 strain N16961) gi|9655894|gb|AAF94556.1| (AE004218) chemotaxis protein methyltransferase CheR [Vibrio cholerae], score 260, E-value 2.00E-68.
 
 0.982
CheR2
Methylase of chemotaxis methyl-accepting proteins; Best Blastp hit = gi|10174272|dbj|BAB05374.1| (AP001512) chemotaxis protein methyltransferase [Bacillus halodurans], score 247, E-value 1.00E-64.
 
 0.982
CheW
Chemotaxis signal transduction protein; Best Blastp hit = gi|11498649|ref|NP_069877.1| purine-binding chemotaxis protein (cheW) [Archaeoglobus fulgidus] gi|7442997|pir||D69380 purine-binding chemotaxis protein (cheW) homolog - Archaeoglobus fulgidus gi|2649556|gb|AAB90206.1| (AE001031) purine-binding chemotaxis protein (cheW) [Archaeoglobus fulgidus], score 108, E-value 5.00E-23.
 
 0.978
CheW3
Chemotaxis signal transduction protein; Best Blastp hit = gi|11355987|pir||B82206 probable purine-binding chemotaxis protein Chew VC1402 [imported] - Vibrio cholerae (group O1 strain N16961) gi|9655897|gb|AAF94559.1| '(AE004218) purine-binding chemotaxis protein Chew, putative [Vibrio cholerae]', score 108, E-value 5.00E-23.
 
 0.978
CheW4
Chemotaxis signal transduction protein; Best Blastp hit = gi|10175591|dbj|BAB06688.1| (AP001517) modulation of CheA activity in response to attractants (chemotaxis protein) [Bacillus halodurans], score 112, E-value 3.00E-24.
 
 0.977
CheW2
Chemotaxis signal transduction protein; Best Blastp hit = gi|11355987|pir||B82206 probable purine-binding chemotaxis protein Chew VC1402 [imported] - Vibrio cholerae (group O1 strain N16961) gi|9655897|gb|AAF94559.1| '(AE004218) purine-binding chemotaxis protein Chew, putative [Vibrio cholerae]', score 289, E-value 7.00E-77.
 
 0.976
Your Current Organism:
Caldanaerobacter subterraneus
NCBI taxonomy Id: 273068
Other names: C. subterraneus subsp. tengcongensis MB4, Caldanaerobacter subterraneus subsp. tengcongensis MB4, Thermoanaerobacter tengcongensis MB4, Thermoanaerobacter tengcongensis str. MB4, Thermoanaerobacter tengcongensis strain MB4
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