STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tar5Best Blastp hit = gi|1075867|pir||A54078 methyl-accepting chemotaxis protein mcpB - Bacillus subtilis, score 230, E-value 4.00E-59. (664 aa)    
Predicted Functional Partners:
CheW
Chemotaxis signal transduction protein; Best Blastp hit = gi|11498649|ref|NP_069877.1| purine-binding chemotaxis protein (cheW) [Archaeoglobus fulgidus] gi|7442997|pir||D69380 purine-binding chemotaxis protein (cheW) homolog - Archaeoglobus fulgidus gi|2649556|gb|AAB90206.1| (AE001031) purine-binding chemotaxis protein (cheW) [Archaeoglobus fulgidus], score 108, E-value 5.00E-23.
 
 0.985
CheA
Chemotaxis protein histidine kinase and related kinases; Best Blastp hit = gi|11354461|pir||E82205 chemotaxis protein CheA VC1397 [imported] - Vibrio cholerae (group O1 strain N16961) gi|9655892|gb|AAF94554.1| (AE004218) chemotaxis protein CheA [Vibrio cholerae], score 326, E-value 8.00E-88.
 
 0.983
CheA2
Chemotaxis protein histidine kinase and related kinases; Best Blastp hit = gi|10175592|dbj|BAB06689.1| (AP001517) two-component sensor histidine kinase involved in chemotaxis [Bacillus halodurans], score 542, E-value 1.00E-153.
 
 0.983
CheB2
Best Blastp hit = gi|11262668|pir||H82122 protein-glutamate methylesterase CheB VC2062 [imported] - Vibrio cholerae (group O1 strain N16961) gi|9656608|gb|AAF95208.1| (AE004280) protein-glutamate methylesterase CheB [Vibrio cholerae], score 155, E-value 3.00E-37.
 0.983
CheB
Protein-glutamate methylesterase/protein-glutamine glutaminase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 0.982
CheR2
Methylase of chemotaxis methyl-accepting proteins; Best Blastp hit = gi|10174272|dbj|BAB05374.1| (AP001512) chemotaxis protein methyltransferase [Bacillus halodurans], score 247, E-value 1.00E-64.
 
 0.982
CheR
Methylase of chemotaxis methyl-accepting proteins; Best Blastp hit = gi|11256950|pir||G82205 chemotaxis protein methyltransferase CheR VC1399 [imported] - Vibrio cholerae (group O1 strain N16961) gi|9655894|gb|AAF94556.1| (AE004218) chemotaxis protein methyltransferase CheR [Vibrio cholerae], score 260, E-value 2.00E-68.
 0.980
CheW3
Chemotaxis signal transduction protein; Best Blastp hit = gi|11355987|pir||B82206 probable purine-binding chemotaxis protein Chew VC1402 [imported] - Vibrio cholerae (group O1 strain N16961) gi|9655897|gb|AAF94559.1| '(AE004218) purine-binding chemotaxis protein Chew, putative [Vibrio cholerae]', score 108, E-value 5.00E-23.
 
 0.977
CheD
Chemotaxis protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
  0.976
CheW4
Chemotaxis signal transduction protein; Best Blastp hit = gi|10175591|dbj|BAB06688.1| (AP001517) modulation of CheA activity in response to attractants (chemotaxis protein) [Bacillus halodurans], score 112, E-value 3.00E-24.
 
 0.975
Your Current Organism:
Caldanaerobacter subterraneus
NCBI taxonomy Id: 273068
Other names: C. subterraneus subsp. tengcongensis MB4, Caldanaerobacter subterraneus subsp. tengcongensis MB4, Thermoanaerobacter tengcongensis MB4, Thermoanaerobacter tengcongensis str. MB4, Thermoanaerobacter tengcongensis strain MB4
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.